Accession PRJCA011685
Title RNA-seq analysis of skeletal muscle transcriptomes from wild-type and Fnip1 whole body knockout (FNIP1 KO) mice
Relevance Medical
Data types Transcriptome or Gene expression
Organisms Mus musculus
Description We generated FNIP1 KO and skeletal muscle specific FNIP1 transgenic mice (MCK-FNIP1 Tg). We also generated FNIP1 KO, PGC-1α f/f-MCK-Cre (DKO) and FNIP1 KO, AMPKα1/α2f/f-Myf5-Cre (TKO) mice, in which the PGC-1α or AMPKα1/α2 genes are disrupted in muscle in FNIP1 KO background. We then performed RNA-seq transcriptome analysis of muscles from WT, FINP1 KO, FNIP1 TgKO, DKO and TKO mice. Our data suggest that FNIP1 deficiency triggers muscle angiogenesis program through PGC-1α but not AMPK.
Sample scope Multiisolate
Release date 2023-10-11
Publication
PubMed ID Article title Journal name DOI Year
37932296 FNIP1 abrogation promotes functional revascularization of ischemic skeletal muscle by driving macrophage recruitment Nature Communications 10.1038/s41467-023-42690-9 2023
Grants
Agency program Grant ID Grant title
National Natural Science Foundation of China (NSFC) 91857105
National Natural Science Foundation of China (NSFC) 31922033
National Natural Science Foundation of China (NSFC) 32071136
National Natural Science Foundation of China (NSFC) 32100922
Ministry of Science and Technology of the People's Republic of China (MOST) 2018YFA0800700
Submitter Zhenji    Gan  (ganzj@nju.edu.cn)
Organization Nanjing University
Submission date 2022-09-05

Project Data

Resource name Description
BioSample (10)  show -
GSA (1) -
CRA008213 RNA-seq analysis of skeletal muscle transcriptomes from wild-type and Fnip1 whole body knockout (FNIP1 KO) mice