项目编号 PRJCA012000
项目标题 Dissecting human developmental disorders caused by CTCF R567W mutation using mouse model
涉及领域 Model organism
数据类型 Epigenomics
物种名称 Mus musculus
描述信息 CCCTC-binding factor (CTCF) mutations cause intellectual impairment, developmental retardation, short stature, and mild cardiac malformations. However, the mechanism is still unknown. In this study, we constructed a mouse disease model harboring a clinically relevant CTCF missense mutation (R567W) and systematically analyzed the changes in transcriptome, CTCF binding and higher-order structure in several tissues by doing RNA-seq, snRNA-seq, ChIP-seq, BL-Hi-C experiments. Our data indicated that the homozygous CTCFR567W mutated mouse showed growth retardation, deficits in neural and cardiopulmonary development and lethality at birth. Mechanically, the CTCFR567W mutation globally weakened chromatin binding of CTCF, resulted in a rearrangement of the 3D genome structure and abnormal expression of cell-type specific genes. Together, We conclude that CTCF R567 plays a vital role in regulating normal development.
样品范围 Monoisolate
发布日期 2024-05-06
出版信息
PubMed ID 文章标题 杂志名称 Doi 发表年份
38951485 CTCF mutation at R567 causes developmental disorders via 3D genome rearrangement and abnormal neurodevelopment Nature Communications 10.1038/s41467-024-49684-1 2024
项目资金来源
机构 项目类型 授权项目ID 授权项目名称
National Natural Science Foundation of China (NSFC) 31925009
提交者 Gongcheng Hu (sciencedb@gibh.ac.cn)
提交单位 Guangzhou Institutes of Biomedicine and Health, Chinese Academy of Sciences
提交日期 2022-09-20

项目包含数据信息

资源名称 描述
BioSample (37)  show -
GSA (1) -
CRA008223 Dissecting human developmental disorders caused by CTCF R567W mutation using mouse model