Accession PRJCA013778
Title de novo genome assembly of Huperzia asiatica
Relevance Evolution
Data types Whole genome sequencing
Transcriptome or Gene expression
Genome sequencing
Organisms Huperzia miyoshiana
Huperzia asiatica
Huperzia serrata
Huperzia lucidula
Description Huperzia asiatica genome was assembled into 138 pseudochromosomes and 2,191 unanchored scaffolds, with a total length of 7.94 Gb and N50 of 57.02 Mb. The genomes of H. asiatica not only fill a crucial gap in the plant genomic landscape, but also uncover a unique genomic signature associated with heterospory-homospory transition.
Sample scope Multispecies
Release date 2022-12-16
Grants
Agency program Grant ID Grant title
National Natural Science Foundation of China (NSFC) 32070242
Submitter Cheng Li (licheng@caas.cn)
Organization Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences
Submission date 2022-12-09

Project Data

Resource name Description
BioSample (30)  show -
GSA (4) -
CRA009247 H.asiatica_PacBio
CRA009235 H.asiatica_wgs
CRA009223 H.asiatica_HiC
CRA009204 H.asiatica_RNA