e.g., PRJCA000229; PRJNA784038; human
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Accession PRJCA017014
Title single-nucleus RNA-seq of pig
Relevance Agricultural
Data types Single cell sequencing
Organisms Sus scrofa
Description We used Laiwu pigs with high (HLW) or low (LLW) IMF contents to explore the cellular and transcriptional mechanisms underlying lipid deposition in highly-marbled pork by single-nucleus RNA sequencing (snRNA-seq)
Sample scope Single cell
Release date 2023-11-28
Publication
PubMed ID Article title Journal name DOI Year
37268610 Single-nucleus and bulk RNA sequencing reveal cellular and transcriptional mechanisms underlying lipid dynamics in high marbled pork NPJ Science of Food 10.1038/s41538-023-00203-4 2023
38472209 Integrative cross-species analysis reveals conserved and unique signatures in fatty skeletal muscles Scientific Data 10.1038/s41597-024-03114-5 2024
Grants
Agency program Grant ID Grant title
National Natural Science Foundation of China (NSFC) 32272887
Submitter liyi wang (liyiwang@zju.edu.cn)
Organization Zhejiang University
Submission date 2023-05-16

Project Data

Resource name Description
BioSample (4) -
SAMC1252107 snRNA-seq of sus scrofa: male longissimus dorsi muscle
SAMC1252106 snRNA-seq of sus scrofa: male longissimus dorsi muscle
SAMC1252105 snRNA-seq of sus scrofa: male longissimus dorsi muscle
SAMC1252104 snRNA-seq of sus scrofa: male longissimus dorsi muscle
GSA (1) -
CRA011059 single-nucleus RNA-seq of pig