项目编号 PRJCA017149
项目标题 Three near-complete genome assemblies reveal substantial centromere dynamics from diploid to tetraploid in Brachypodium genus
涉及领域 Evolution
数据类型 Genome sequencing and assembly
物种名称 Brachypodium
描述信息 Centromeres are critical for maintaining genomic stability in eukaryotes, and their turnover can shape genome architectures and drive karyotype evolution. However, the co-evolution of centromeres from different species in allopolyploids over millions of years remains largely unknown. Here, we constructed three near-complete genome assemblies for B. hybridum, B. distachyon, and B. stacei, and provided the first comprehensive comparison of previously inaccessible centromeric regions across species with different polyploidy levels. Our findings offer novel scientific insights into the sequences, structural, and epigenetic variations in centromeres of closely related species, and their potential roles during polyploidy adaptions at base-pair resolution.
样品范围 Multispecies
发布日期 2024-02-09
项目资金来源
机构 项目类型 授权项目ID 授权项目名称
National Key Research and Development Program of China 2021YFF1000800
National Natural Science Foundation of China (NSFC) 32170571
Fundamental Research Funds for the Central Universities 2021ZKPY008
Hainan Yazhou Bay Seed Laboratory B21HJ0504
Natural Science Foundation of Hubei Province of China 2021CFB097
提交者 Handong Su (shandong@mail.hzau.edu.cn)
提交单位 National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University
提交日期 2023-05-10

项目包含数据信息

资源名称 描述
BioSample (5) -
SAMC1255401 IBd483_Hi-C
SAMC1255400 Bst99_Hi-C
SAMC1255399 IBd483_HiFi
SAMC1255398 Bst99_HiFi
SAMC1255397 Bdi21_HiFi
GSA (1) -
CRA011125 Three near-complete genome assemblies reveal substantial centromere dynamics from diploid to tetraploid in Brachypodium genus