项目编号 PRJCA017256
项目标题 Single-microbe RNA sequencing for human gut microbiome
涉及领域 Medical
数据类型 Single cell sequencing
物种名称 Prevotella
human gut metagenome
描述信息 We devised a novel high throughput sequencing technology called MIC-seq which capturing total RNAs of single microbes to investigate their transcriptional activity and functional heterogeneity in complex microbial community of human gut.
样品范围 Multispecies
发布日期 2024-05-31
出版信息
PubMed ID 文章标题 杂志名称 Doi 发表年份
40407385 mKmer: an unbiased K -mer embedding of microbiomic single-microbe RNA sequencing data Briefings in Bioinformatics 10.1093/bib/bbaf227 2025
38779805 High-throughput single-microbe RNA sequencing reveals adaptive state heterogeneity and host-phage activity associations in human gut microbiome Protein & Cell 10.1093/procel/pwae027 2024
项目资金来源
机构 项目类型 授权项目ID 授权项目名称
National Natural Science Foundation of China (NSFC) No.32200073
National Natural Science Foundation of China (NSFC) No.82200977
Leading Innovative and Entrepreneur Team Introduction Program of Zhejiang No.2021R01012
Zhejiang Provincial Natural Science Foundation of China No.LQ23H200003
提交者 Qinghong Qian (12016020@zju.edu.cn)
提交单位 Zhejiang University
提交日期 2023-05-25

项目包含数据信息

资源名称 描述
BioSample (4) -
SAMC3766839 smRandom-seq2 of human fecal HD3-d2-17
SAMC3766838 smRandom-seq2 of human fecal HD2-wzl1
SAMC3766837 smRandom-seq2 of human fecal HD1-H
SAMC1266599 Gut_microbiome_sample1
GSA (2) -
CRA016741 Single-microbe RNA sequencing for healthy human gut microbiome
CRA011219 Single-microbe RNA sequencing for human gut microbiome