项目编号 PRJCA017354
项目标题 The watermelon T2T pan-genome
涉及领域 Agricultural
数据类型 Whole genome sequencing
Epigenomics
Transcriptome or Gene expression
Raw sequence reads
Genome sequencing
物种名称 Citrullus naudinianus
Citrullus rehmii
Citrullus mucosospermus
Citrullus colocynthis
Citrullus ecirrhosus
Citrullus lanatus
Citrullus amarus
描述信息 In this study, 27 representative germplasm covering seven species of Citrullus genus were sequenced by HiFi. Pan-genome of wild and cultivated watermelon was constructed after the raw data was processed with genome assembly and annotation. In addition, core and dispensable genes were analyzed to variation identification and trait association study.
样品范围 Multispecies
发布日期 2023-09-13
项目资金来源
机构 项目类型 授权项目ID 授权项目名称
Science and Technology Department of Ningxia Hui Autonomous Region NXNYYZ202001
Ningbo Science and Technology Bureau 2021Z132
提交者 yilin zhang (yilinzhang@stu.pku.edu.cn)
提交单位 Peking University
提交日期 2023-05-29

项目包含数据信息

资源名称 描述
BioSample (418)  show -
GSA (2) -
CRA012625 CR_HIC
CRA011278 The watermelon T2T pan-genome