项目编号 PRJCA018610
项目标题 The complete sequence of a rice reference genome
涉及领域 Agricultural
数据类型 Whole genome sequencing
物种名称 Oryza sativa Japonica Group
描述信息 We here firstly assembled a complete genome sequence of the rice reference genome (Nipponbare), named T2T-NIP, derived from a total of 36 Gb Hi-C dataset, 1043 Gb PacBio HIFI reads, 173 Gb Nanopore ONT reads, 23 Gb Illumina Paired-End reads, 11 Gb Illumina Paired-End RNA-Seq reads and 10 Gb Full-length RNA-Seq reads. By evaluating and verifying the quality of the genome in terms of assembly statistics, gap and assembly errors, gene distribution and segmental repeats, we proved the advantage of this new reference genome on assembly completeness, sequence accuracy and functional elements annotation.
样品范围 Monoisolate
发布日期 2023-08-08
项目资金来源
机构 项目类型 授权项目ID 授权项目名称
National Natural Science Foundation of China (NSFC) 32188102/32101718
提交者 Shang Lianguang (shanglianguang@163.com)
提交单位 Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences
提交日期 2023-07-26

项目包含数据信息

资源名称 描述
BioSample (1) -
SAMC2963014 The complete sequence of a rice reference genome