项目编号

PRJCA018671

项目标题

ATAC-Seq and RNA-Seq data of Crassostrea ariakensis at different gonadal developmental stages

涉及领域

Agricultural

数据类型

Epigenomics
Transcriptome or Gene expression
Raw sequence reads

物种名称

Crassostrea ariakensis

描述信息

Jinjiang oyster Crassostrea ariakensis is an economically and ecologically important species in China. In this study, RNA sequencing (RNA-seq) and assay for transposase-accessible chromatin using sequencing (ATAC-seq) were performed respectively to explore the gene expression and dynamic changes of chromatin accessibility among the oysters with different glycogen contents.

样品范围

Monoisolate

发布日期

2023-07-29

出版信息

PubMed ID	文章标题	杂志名称	Doi	发表年份
38199974	Combined ATAC-seq, RNA-seq, and GWAS analysis reveals glycogen metabolism regulatory network in Jinjiang oyster ( Crassostrea ariakensis )	Zoological Research	10.24272/j.issn.2095-8137.2023.021	2024

项目资金来源

机构	项目类型	授权项目ID	授权项目名称
National Key R&D Program of China		2022YFD2400100
Central Public-interest Scientific Institution Basal Research Fund, CAFS		2021XT0102
Marine S&T Fund of Shandong Province for Pilot National Laboratory for Marine Science and Technology (Qingdao)		2021QNLM050103
Key Research and Development Project of Shandong Province		2021LZGC028

提交者

Xi Chen (chenxi2647150@163.com)

提交单位

Yellow Sea Fisheries Research Institute, Chinese Academy of Fishery Sciences

提交日期

2023-07-29

项目包含数据信息

资源名称	描述
BioSample (15) show	-
SAMC2966507	RNA-Seq and ATAC-seq of Crassostrea ariakensis: adult female gonads
SAMC2966506	RNA-Seq and ATAC-seq of Crassostrea ariakensis: adult female gonads
SAMC2966505	RNA-Seq and ATAC-seq of Crassostrea ariakensis: adult female gonads
SAMC2966504	RNA-Seq and ATAC-seq of Crassostrea ariakensis: adult female gonads
SAMC2966503	RNA-Seq and ATAC-seq of Crassostrea ariakensis: adult female gonads
SAMC2966502	RNA-Seq and ATAC-seq of Crassostrea ariakensis: adult female gonads
SAMC2966501	RNA-Seq and ATAC-seq of Crassostrea ariakensis: adult female gonads
SAMC2966500	RNA-Seq and ATAC-seq of Crassostrea ariakensis: adult female gonads
SAMC2966499	RNA-Seq and ATAC-seq of Crassostrea ariakensis: adult female gonads
SAMC2966498	RNA-Seq of Crassostrea ariakensis: adult female gonads
SAMC2966497	RNA-Seq of Crassostrea ariakensis: adult female gonads
SAMC2966496	RNA-Seq of Crassostrea ariakensis: adult female gonads
SAMC2966495	RNA-Seq of Crassostrea ariakensis: adult female gonads
SAMC2966494	RNA-Seq of Crassostrea ariakensis: adult female gonads
SAMC2966493	RNA-Seq of Crassostrea ariakensis: adult female gonads
GSA (1)	-
CRA012041	ATAC-Seq and RNA-Seq data of Crassostrea ariakensis at different gonadal developmental stages