项目编号 PRJCA018693
项目标题 Modular DNA Barcoding of Nanobodies Enables Multiplexed in situ Protein Imaging and High-throughput Biomolecule Detection
涉及领域 Medical
数据类型 Barcoded reads
物种名称 unidentified
描述信息 The antibody-antigen interaction-based immunodetection methods are routinely used in biological and clinical laboratories. DNA-labeled antibodies have the advantage of detecting multiple target molecules simultaneously via orthogonal DNA barcode sequences. However, current antibody-DNA conjugation commonly uses non-site-specific modifications tailor-made for each specific application, which is laborious and often compromises antibody affinity and specificity. To overcome these limitations, here we introduce a simple, precise, and cost-efficient DNA barcoding strategy - multiplexed and modular barcoding of antibodies (MaMBA). Via nanobodies as the modular adaptor, MaMBA enables direct site-specific labeling to off-the-shelf IgG antibodies with one-component design. We first used MaMBA to develop the misHCR method for highly multiplexed in situ protein imaging via orthogonal hybridization chain reaction (HCR). A cleavable version of MaMBA allows iterative employment of the same HCR probes sets and thus further enhances the multiplexity of misHCR (misHCRn). misHCRn achieves simultaneous labeling of 12 different target molecules within the same mouse brain sections. We next extended the cleavable MaMBA to develop the barcode-linked immunosorbent assay (BLISA) for multiplexed and high-throughput biomolecule detections. By combining BLISA and the next-generation sequencing, we successfully measured SARS-CoV-2 IgG and HBV-associated antigens in a large number of human serum samples. Thus, MaMBA offers a highly modular and easily adaptable approach for antibody DNA-barcoding, which can be broadly applied in basic research and clinical diagnostics.
样品范围 Barcoded reads
发布日期 2025-07-17
项目资金来源
机构 项目类型 授权项目ID 授权项目名称
Ministry of Science and Technology China Brain Initiative Grant 2021ZD0202803
Research Unit of Medical Neurobiology at Chinese Academy of Medical Sciences 2019RU003
提交者 Ruiyu Wang (wangruiyu@cibr.ac.cn)
提交单位 Chinese Institute for Brain Research
提交日期 2023-07-30

项目包含数据信息

资源名称 描述
BioSample (3) -
SAMC2967982 BLISA_HBV
SAMC2967981 BLISA_CoV2
SAMC2967980 BLISA_CGM
GSA (1) -
CRA012054 Modular DNA Barcoding of Nanobodies Enables Multiplexed in situ Protein Imaging and High-throughput Biomolecule Detection