Accession

PRJCA019347

Title

Exploring the landscape of symbiotic diversity and distribution in unicellular ciliated protists

Relevance

endosymbionts

Data types

Genome sequencing and assembly
Assembly
Metagenomic assembly

Organisms

metagenome

Description

Eukaryotic-bacterial symbiotic systems play important roles in various physiologic, developmental and evolutionary processes. Our current understanding of these systems, however, is primarily focused on multicellular eukaryotes without adequate consideration of diverse unicellular protozoan ciliates. To address this gap, we collected 246 ciliate samples representing the full breadth of the Ciliophora phylum and sequenced the genomes of bacteria associated with these unicellular organisms using single-cell genome sequencing.

Sample scope

Multispecies

Release date

2023-08-31

Grants

Agency	program	Grant ID	Grant title
National Natural Science Foundation of China (NSFC)		32070432
National Natural Science Foundation of China (NSFC)		32025009
National Natural Science Foundation of China (NSFC)		31672279

Submitter

bing zhang (bingzhang_bio@qq.com)

Organization

Beijing Institutes of Life Science, Chinese Academy of Sciences

Submission date

2023-08-27

Project Data

Resource name	Description
BioSample (76) show	-
SAMC3036773	Amplification of the ciliate using MDA
SAMC3036772	Amplification of the ciliate using MALBAC
SAMC3036771	Amplification of the ciliate using MDA
SAMC3036770	Amplification of the ciliate using MALBAC
SAMC3036769	Amplification of the ciliate using MDA
SAMC3036768	Amplification of the ciliate using MDA
SAMC3036767	Amplification of the ciliate using MDA
SAMC3036766	Amplification of the ciliate using MALBAC
SAMC3036765	Amplification of the ciliate using MDA
SAMC3036764	Amplification of the ciliate using MDA
SAMC3036763	Amplification of the ciliate using MDA
SAMC3036762	Amplification of the ciliate using MDA
SAMC3036761	Amplification of the ciliate using MDA
SAMC3036760	Amplification of the ciliate using MDA
SAMC3036759	Amplification of the ciliate using MALBAC
SAMC3036758	Amplification of the ciliate using MDA
SAMC3036757	Amplification of the ciliate using MDA
SAMC3036756	Amplification of the ciliate using MALBAC
SAMC3036755	Amplification of the ciliate using MALBAC
SAMC3036754	Amplification of the ciliate using MALBAC
SAMC3036753	Amplification of the ciliate using MALBAC
SAMC3036752	Amplification of the ciliate using MALBAC
SAMC3036751	Amplification of the ciliate using MDA
SAMC3036750	Amplification of the ciliate using MDA
SAMC3036749	Amplification of the ciliate using MDA
SAMC3036748	Amplification of the ciliate using MDA
SAMC3036747	Amplification of the ciliate using MALBAC
SAMC3036746	Amplification of the ciliate using MDA
SAMC3036745	Amplification of the ciliate using MALBAC
SAMC3036744	Amplification of the ciliate using MALBAC
SAMC3036743	Amplification of the ciliate using MDA
SAMC3036742	Amplification of the ciliate using MDA
SAMC3036741	Amplification of the ciliate using MDA
SAMC3036740	Amplification of the ciliate using MALBAC or MDA
SAMC3036739	Amplification of the ciliate using MALBAC
SAMC3036738	Amplification of the ciliate using MALBAC
SAMC3036737	Amplification of the ciliate using MDA
SAMC3036736	Amplification of the ciliate using MALBAC
SAMC3036735	Amplification of the ciliate using MDA
SAMC3036734	Amplification of the ciliate using MALBAC
SAMC3036733	Amplification of the ciliate using MDA
SAMC3036732	Amplification of the ciliate using MALBAC
SAMC3036731	Amplification of the ciliate using MALBAC
SAMC3036730	Amplification of the ciliate using MDA
SAMC3036729	Amplification of the ciliate using MALBAC
SAMC3036728	Amplification of the ciliate using MDA
SAMC3036727	Amplification of the ciliate using MDA
SAMC3036726	Amplification of the ciliate using MALBAC
SAMC3036725	Amplification of the ciliate using MDA
SAMC3036724	Amplification of the ciliate using MDA
SAMC3036723	Amplification of the ciliate using MALBAC
SAMC3036722	Amplification of the ciliate using MALBAC
SAMC3036721	Amplification of the ciliate using MDA
SAMC3036720	Amplification of the ciliate using MDA
SAMC3036719	Amplification of the ciliate using MDA
SAMC3036718	Amplification of the ciliate using MALBAC
SAMC3036717	Amplification of the ciliate using MALBAC
SAMC3036716	Amplification of the ciliate using MDA
SAMC3036715	Amplification of the ciliate using MALBAC
SAMC3036714	Amplification of the ciliate using MALBAC
SAMC3036713	Amplification of the ciliate using MALBAC
SAMC3036712	Amplification of the ciliate using MDA
SAMC3036711	Amplification of the ciliate using MDA
SAMC3036710	Amplification of the ciliate using MALBAC
SAMC3036709	Amplification of the ciliate using MALBAC
SAMC3036708	Amplification of the ciliate using MDA
SAMC3036707	Amplification of the ciliate using MALBAC
SAMC3036706	Amplification of the ciliate using MALBAC
SAMC3036705	Amplification of the ciliate using MDA
SAMC3036704	Amplification of the ciliate using MALBAC
SAMC3036703	Amplification of the ciliate using MALBAC
SAMC3036702	Amplification of the ciliate using MALBAC
SAMC3036701	Amplification of the ciliate using MDA
SAMC3036700	Amplification of the ciliate using MALBAC
SAMC3036699	Amplification of the ciliate using MDA
SAMC3036698	Amplification of the ciliate using MALBAC
GSA (1)	-
CRA012437	Batch1: Source samples of representative single genomic bins (rSGBs) for bacteria, with all suspected eukaryotic organism read data excluded.