项目编号 PRJCA019635
项目标题 Pepper super pan-genome
涉及领域 Agricultural
数据类型 Whole genome sequencing
Epigenomics
Transcriptome or Gene expression
Variation
Genome sequencing and assembly
Raw sequence reads
Assembly
物种名称 Capsicum baccatum
Capsicum rhomboideum
Capsicum frutescens
Capsicum chinense
Capsicum annuum
Capsicum eximium
Capsicum annuum var. glabriusculum
Capsicum pubescens
Capsicum chacoense
描述信息 Genome sequenceing and assemble data of pepper supper pan-genome
样品范围 Multiisolate
发布日期 2024-12-30
出版信息
PubMed ID 文章标题 杂志名称 Doi 发表年份
39875669 Transposon proliferation drives genome architecture and regulatory evolution in wild and domesticated peppers Nature Plants 10.1038/s41477-025-01905-1 2025
项目资金来源
机构 项目类型 授权项目ID 授权项目名称
National Natural Science Foundation of China (NSFC) General Program N/A
提交者 lingkui zhang (1570263833@qq.com)
提交单位 Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences
提交日期 2023-09-09

项目包含数据信息

资源名称 描述
BioSample (180)  show -
GSA (5) -
CRA030955 WGS data of 124 pepper accessions
CRA015292 ATAC data of pepper pangenome
CRA015029 ONT and Hifi data of pepper pangenome
CRA015033 illumina data of pepper pangenome
CRA013434 HiC data of pepper super pangenome