| Accession |
PRJCA019722 |
| Title |
Dissection of a Cell Atlas of Developing Somatic Embryos in Cotton by Single-Cell RNA-Sequencing and Spatial Transcriptomic and Metabolomic Analyses |
| Relevance |
Agricultural |
| Data types |
metabolomics
|
| Organisms |
Gossypium hirsutum
|
| Description |
In the present study, we investigated the spatial and single-cell expression profiles of key genes and the metabolic patterns of key metabolites by integrated single-cell RNA-sequencing (scRNA-seq), spatial transcriptomics (ST), and spatial metabolomics (SM). To evaluate the results of these analyses, we functionally characterized the potential roles of two representative marker genes, AATP1 and DOX2, in the regulation of cotton somatic embryo development. |
| Sample scope |
Monoisolate |
| Release date |
2023-09-12 |
| Grants |
| Agency |
program |
Grant ID |
Grant title |
| National Key Research and Development Program
|
|
2021YFF1000102
|
|
| National Key Research and Development Program
|
|
2022YFD1200300
|
|
|
|
| Submitter |
xuwu
sun (sunxuwussd@sina.com)
|
| Organization |
State Key Laboratory of Cotton Biology, State Key Laboratory of Crop Stress Adaptation and Improvement, Key Laboratory of Plant Stress Biology, School of Life Sciences, Henan University |
| Submission date |
2023-09-12 |
