| Accession |
PRJCA020126 |
| Title |
Dissection of a Cell Atlas of Developing Somatic Embryos in Cotton by Single-Cell RNA-Sequencing and Spatial Transcriptomic and Metabolomic Analyses: a targeted metabolomics validation |
| Relevance |
Agricultural |
| Data types |
targeted metabolomics
|
| Organisms |
Gossypium hirsutum
|
| Description |
In the present study, we investigated the spatial and single-cell expression profiles of key genes and the metabolic patterns of key metabolites by integrated single-cell RNA-sequencing (scRNA-seq), spatial transcriptomics (ST), and spatial metabolomics (SM). To evaluate the results of the spatial metabolomics, we performed a multiple reaction monitoring (MRM) targeted metabolomics analysis. |
| Sample scope |
Monoisolate |
| Release date |
2023-09-26 |
| Grants |
| Agency |
program |
Grant ID |
Grant title |
| National Key Research and Development Program
|
|
2021YFF1000102
|
|
| National Key Research and Development Program
|
|
2022YFD1200300
|
|
|
|
| Submitter |
xuwu
sun (sunxuwussd@sina.com)
|
| Organization |
State Key Laboratory of Cotton Biology, State Key Laboratory of Crop Stress Adaptation and Improvement, Key Laboratory of Plant Stress Biology, School of Life Sciences, Henan University |
| Submission date |
2023-09-26 |
