Accession PRJCA020659
Title Comprehensive analysis of disulfidptosis-related genes reveals the effect of disulfidptosis in ulcerative colitis
Relevance Medical
Data types metabolomics
Organisms Mus musculus
Homo sapiens
Description An appropriate amount of sample was added to 400 μL of precooled (4°C) methanol-water (v/v=4:1, containing 0.1% formic acid and 1 mM BHT, containing internal standard succinate-2,2,3,3-d4). Two steel beads were added, and the mixture was placed in a freezer at -20 °C for 2 min, placed into a grinder for grinding (60 Hz,2 min), vortexed for 1 min, sonicated in an ice-water bath for 10 min, and centrifuged for 10 min (4 °C,12,000 rpm). After 10 min (4 °C,12,000 rpm),300 μL of supernatant was evaporated. Then,300 μL of precooled (4 °C) methanol-water (v/v=4:1, containing 0.1% formic acid,1 mM BHT, containing internal standard succinic acid-2,2,3,3-d4) was added to the residue of the supernatant; vortexing was performed for 1 min, sonication was carried out in an ice-water bath for 10 min, and the supernatant was centrifuged for 10 min (4 °C,12000 rpm), vortexed for 1 min, sonicated for 10 min, and centrifuged for 10 min (4 °C,12,000 rpm). Then,300 μL of supernatant was evaporated; the supernatant was resolubilized with 200 uL of 95% aqueous acetonitrile (containing L-2-chlorophenylalanine), vortexed for 30 seconds, sonicated for 5 min in an ice-water bath, and centrifuged for 5 min (4 °C,13000 pm). The supernatant was drawn up by a syringe, filtered by using a hydrophilic syringe with a 0.22-μm filter, transferred to a brown injection vial, and analyzed by LC-MS. The target metabolites were quantitatively and qualitatively detected by LC-MS.
Sample scope Multispecies
Release date 2023-10-20
Publication
PubMed ID Article title Journal name DOI Year
38977802 Comprehensive analysis of disulfidptosis-related genes reveals the effect of disulfidptosis in ulcerative colitis Scientific Reports 10.1038/s41598-024-66533-9 2024
Grants
Agency program Grant ID Grant title
The First Affiliated Hospital of Kunming Medical University General Program 81960108 National Natural Science Foundation of China (NSFC)
The First Affiliated Hospital of Kunming Medical University General Program 82170550 National Natural Science Foundation of China (NSFC)
The First Affiliated Hospital of Kunming Medical University General Program 82160107 National Natural Science Foundation of China (NSFC)
The First Affiliated Hospital of Kunming Medical University General Program 8217033504 National Natural Science Foundation of China (NSFC)
The First Affiliated Hospital of Kunming Medical University Applied Basic Research Projects of Yunnan Province 202201AY070001-048 Applied Basic Research Projects of Yunnan Province
The First Affiliated Hospital of Kunming Medical University Applied Basic Research Projects of Yunnan Province 202301AT070091 Applied Basic Research Projects of Yunnan Province
The First Affiliated Hospital of Kunming Medical University Youth Talents Program of Yunnan Province RLQB20220004 Youth Talents Program of Yunnan Province
The First Affiliated Hospital of Kunming Medical University Yunnan Health Training Project of High Level Talents H-2019050 Yunnan Health Training Project of High Level Talents
The First Affiliated Hospital of Kunming Medical University 535 Talent Project of First Affiliated Hospital of Kunming Medical University 2023535D06 535 Talent Project of First Affiliated Hospital of Kunming Medical University
The First Affiliated Hospital of Kunming Medical University 535 Talent Project of First Affiliated Hospital of Kunming Medical University 2023533Q03 535 Talent Project of First Affiliated Hospital of Kunming Medical University
Kunming Medical University Special grant for research on the application of single-cell sequencing in ulcerative colitis 7012204 Special grant for research on the application of single-cell sequencing in ulcerative colitis
Submitter Huixian Song (shx502375150@163.com)
Organization The First Affiliated Hospital of Kunming Medical University, Kunming, China
Submission date 2023-10-20

Project Data

Resource name Description