Accession

PRJCA021927

Title

Metagenomic, transcriptomic, and proteomic sequencing of lung adenocarcinoma

Relevance

Medical

Data types

Metagenome
Transcriptome or Gene expression
proteomic of tissue

Organisms

Homo sapiens
human

Description

A prospective collection of ES-LUAD samples and their corresponding normal tissues adjacent to the tumor , along with samples from patients with spontaneous pneumothorax and normal lung tissues adjacent to lung bullae, were subjected to ultra-deep macro-genomic sequencing, host transcriptomic sequencing, and proteomic sequencing. We aim to systematically characterized the local microbial community and its associated features to enable early intervention.

Sample scope

Multiisolate

Release date

2023-12-15

Publication

PubMed ID	Article title	Journal name	DOI	Year
38997719	Integrative metagenomic, transcriptomic, and proteomic analysis reveal the microbiota-host interplay in early-stage lung adenocarcinoma among non-smokers	Journal Of Translational Medicine	10.1186/s12967-024-05485-0	2024

Grants

Agency	program	Grant ID	Grant title
The Fifth Affiliated Hospital of Sun Yat-sen University		220904094208

Submitter

Qingdong Cao (caoqd@mail.sysu.edu.cn)

Organization

The Fifth Affiliated Hospital of Sun Yat-Sen University

Submission date

2023-12-10

Project Data

Resource name	Description
BioSample (76) show	-
SAMC3268522	Trancriptomic sequencing of human LUAD-tumor36
SAMC3268521	Trancriptomic sequencing of human LUAD-tumor35
SAMC3268520	Trancriptomic sequencing of human LUAD-tumor34
SAMC3268519	Trancriptomic sequencing of human LUAD-tumor33
SAMC3268518	Trancriptomic sequencing of human LUAD-tumor32
SAMC3268517	Trancriptomic sequencing of human LUAD-tumor31
SAMC3268516	Trancriptomic sequencing of human LUAD-tumor30
SAMC3268515	Trancriptomic sequencing of human LUAD-tumor29
SAMC3268514	Trancriptomic sequencing of human LUAD-tumor28
SAMC3268513	Trancriptomic sequencing of human LUAD-tumor27
SAMC3268512	Trancriptomic sequencing of human LUAD-tumor26
SAMC3268511	Trancriptomic sequencing of human LUAD-tumor25
SAMC3268510	Trancriptomic sequencing of human LUAD-tumor24
SAMC3268509	Trancriptomic sequencing of human LUAD-tumor23
SAMC3268508	Trancriptomic sequencing of human LUAD-tumor22
SAMC3268507	Trancriptomic sequencing of human LUAD-tumor21
SAMC3268506	Trancriptomic sequencing of human LUAD-tumor20
SAMC3268505	Trancriptomic sequencing of human LUAD-tumor19
SAMC3268504	Trancriptomic sequencing of human LUAD-tumor18
SAMC3268503	Trancriptomic sequencing of human LUAD-tumor17
SAMC3268502	Trancriptomic sequencing of human LUAD-tumor16
SAMC3268501	Trancriptomic sequencing of human LUAD-tumor15
SAMC3268500	Trancriptomic sequencing of human LUAD-tumor14
SAMC3268499	Trancriptomic sequencing of human LUAD-tumor13
SAMC3268498	Trancriptomic sequencing of human LUAD-tumor12
SAMC3268497	Trancriptomic sequencing of human LUAD-tumor11
SAMC3268496	Trancriptomic sequencing of human LUAD-tumor10
SAMC3268495	Trancriptomic sequencing of human LUAD-tumor9
SAMC3268494	Trancriptomic sequencing of human LUAD-tumor8
SAMC3268493	Trancriptomic sequencing of human LUAD-tumor7
SAMC3268492	Trancriptomic sequencing of human LUAD-tumor6
SAMC3268491	Trancriptomic sequencing of human LUAD-tumor5
SAMC3268490	Trancriptomic sequencing of human LUAD-tumor4
SAMC3268489	Trancriptomic sequencing of human LUAD-tumor3
SAMC3268488	Trancriptomic sequencing of human LUAD-tumor2
SAMC3268487	Trancriptomic sequencing of human LUAD-tumor1
SAMC3268486	Trancriptomic sequencing of human control lung tissues 40
SAMC3268485	Trancriptomic sequencing of human control lung tissues 39
SAMC3268484	Trancriptomic sequencing of human control lung tissues 38
SAMC3268483	Trancriptomic sequencing of human control lung tissues 37
SAMC3268482	Trancriptomic sequencing of human control lung tissues 36
SAMC3268481	Trancriptomic sequencing of human control lung tissues 35
SAMC3268480	Trancriptomic sequencing of human control lung tissues 34
SAMC3268479	Trancriptomic sequencing of human control lung tissues 33
SAMC3268478	Trancriptomic sequencing of human control lung tissues 32
SAMC3268477	Trancriptomic sequencing of human control lung tissues 31
SAMC3268476	Trancriptomic sequencing of human control lung tissues 30
SAMC3268475	Trancriptomic sequencing of human control lung tissues 29
SAMC3268474	Trancriptomic sequencing of human control lung tissues 28
SAMC3268473	Trancriptomic sequencing of human control lung tissues 27
SAMC3268472	Trancriptomic sequencing of human control lung tissues 26
SAMC3268471	Trancriptomic sequencing of human control lung tissues 25
SAMC3268470	Trancriptomic sequencing of human control lung tissues 24
SAMC3268469	Trancriptomic sequencing of human control lung tissues 23
SAMC3268468	Trancriptomic sequencing of human control lung tissues 22
SAMC3268467	Trancriptomic sequencing of human control lung tissues 21
SAMC3268466	Trancriptomic sequencing of human control lung tissues 20
SAMC3268465	Trancriptomic sequencing of human control lung tissues 19
SAMC3268464	Trancriptomic sequencing of human control lung tissues 18
SAMC3268463	Trancriptomic sequencing of human control lung tissues 17
SAMC3268462	Trancriptomic sequencing of human control lung tissues 16
SAMC3268461	Trancriptomic sequencing of human control lung tissues 15
SAMC3268460	Trancriptomic sequencing of human control lung tissues 14
SAMC3268459	Trancriptomic sequencing of human control lung tissues 13
SAMC3268458	Trancriptomic sequencing of human control lung tissues 12
SAMC3268457	Trancriptomic sequencing of human control lung tissues 11
SAMC3268456	Trancriptomic sequencing of human control lung tissues 10
SAMC3268455	Trancriptomic sequencing of human control lung tissues 9
SAMC3268454	Trancriptomic sequencing of human control lung tissues 8
SAMC3268453	Trancriptomic sequencing of human control lung tissues 7
SAMC3268452	Trancriptomic sequencing of human control lung tissues 6
SAMC3268451	Trancriptomic sequencing of human control lung tissues 5
SAMC3268450	Trancriptomic sequencing of human control lung tissues 4
SAMC3268449	Trancriptomic sequencing of human control lung tissues 3
SAMC3268448	Trancriptomic sequencing of human control lung tissues 2
SAMC3268447	Trancriptomic sequencing of human control lung tissues 1