| 项目编号 | PRJCA022025 | ||||||||||||
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| 项目标题 | Haplotype-resolved chromosome-level genome assembly of Huyou (Citrus changshanensis) | ||||||||||||
| 涉及领域 | Agricultural | ||||||||||||
| 数据类型 |
Whole genome sequencing
Transcriptome or Gene expression Genome sequencing and assembly Raw sequence reads |
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| 物种名称 | Citrus x changshan-huyou | ||||||||||||
| 描述信息 | In this study, we report a phased chromosome-level genome assembly of Huyou. Hifiasm combined Pacbio and Hi-C sequencing reads, resulted in one primary genome assembly and two haplotypes, which contain nine pseudochromosomes with sizes of 338.11Mb, 325.16Mb, and 313.78 Mb, respectively. Using the transcriptome data and annotations of homologous species, we identified a total of 30,390 protein-coding genes and 177.55 Mb repetitive sequences in the genome of Huyou. | ||||||||||||
| 样品范围 | Multiisolate | ||||||||||||
| 发布日期 | 2023-12-13 | ||||||||||||
| 项目资金来源 |
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| 提交者 | Changjiu Miao (1539637481@qq.com) | ||||||||||||
| 提交单位 | Zhejiang University | ||||||||||||
| 提交日期 | 2023-12-13 |