| Accession |
PRJCA023529 |
| Title |
Metabolome-driven microbiome assembly of ginger crop (Zingiber officinale L. Roscoe). |
| Relevance |
Agricultural |
| Data types |
Raw sequence reads
|
| Organisms |
Zingiber officinale
|
| Description |
Ginger rhizome rot has been variously attributed to multiple individual causal agents. Due to its global relevance, we used ginger as a model to elucidate the metabolome-driven microbiome assembly associated with plant health and culture conditions. The main findings of our study are a complete picture of the biodiversity of soilborne and endophytic microbiota in healthy and diseased ginger plant niches, highlighting bacterial and fungal microbes that potentially contribute to plant health. Metabolites that drive microbiome assembly closely related to plant health and culture conditions in diverse microbial niches were revealed. |
| Sample scope |
Multispecies |
| Release date |
2024-02-17 |
| Publication |
| PubMed ID |
Article title |
Journal name |
DOI |
Year |
| 38992353
|
Insights into the microbial assembly and metabolites associated with ginger (Zingiber officinale L. Roscoe) microbial niches and agricultural environments
|
The Science Of the Total Environment
|
10.1016/j.scitotenv.2024.174395
|
2024
|
| 39244625
|
Metabolome-driven microbiome assembly determining the health of ginger crop (Zingiber officinale L. Roscoe) against rhizome rot
|
Microbiome
|
10.1186/s40168-024-01885-y
|
2024
|
|
|
| Grants |
| Agency |
program |
Grant ID |
Grant title |
| Shandong Province
|
Double Hundred Talent
|
WSG20200001
|
|
|
|
| Accessions in other database |
| Accession |
Database name |
| PRJNA1035274
|
NCBI
|
| PRJNA1035275
|
NCBI
|
|
|
| Submitter |
RAMON
SANTOS BERMUDEZ (bio_ramon@ujn.edu.cn)
|
| Organization |
University of Jinan |
| Submission date |
2024-02-07 |
