Accession PRJCA024165
Title The heterochronic gene Oryza sativa LIKE HETEROCHROMATIN PROTEIN 1 modulates miR156b/c/i/e levels
Relevance Agricultural
Data types Epigenomics
Organisms Oryza sativa
Description The juvenile-to-adult transition in plants involves changes in vegetative growth and plant architecture; the timing of this transition has important implications for agriculture. The microRNA miR156 regulates this transition and shoot maturation in plants. In Arabidopsis thaliana, deposition of histone H3 trimethylation on lysine 27 (H3K27me3, a repressive mark) at the MIR156A/C loci is regulated by Polycomb Repressive Complex 1 (PRC1) or PRC2, depending on the developmental stage. The levels of miR156 progressively decline during shoot maturation. The amount of H3K27me3 at MIR156A/C loci affects miR156 levels; however, whether this epigenetic regulation is conserved remains unclear. Here, we found that in rice (Oryza sativa), the putative PRC1 subunit LIKE HETEROCHROMATIN PROTEIN 1 (OsLHP1), with the miR156-SQUAMOSA PROMOTER BINDING PROTEIN-LIKE (SPL) module, affects developmental phase transitions. Loss of OsLHP1 function results in ectopic expression of MIR156B/C/I/E, phenocopy of miR156 over-expression, and reduced H3k27me3 levels atMIR156B/C/I/E. This indicates that OsLHP1has functionally diverged from Arabidopsis LHP1. Genetic and transcriptome analyses of wild-type, miR156b/c-overexpression, and Oslhp1-2 mutant plants suggest that OsLHP1 acts upstream of miR156 and SPL during the juvenile-to-adult transition. Therefore, modifying the OsLHP1-miR156-SPL pathway may enable alteration of the vegetative period and plant architecture.
Sample scope Monoisolate
Release date 2024-03-10
Publication
PubMed ID Article title Journal name DOI Year
10.1111/jipb.12991
Grants
Agency program Grant ID Grant title
National Natural Science Foundation of China (NSFC) 31771887
National Natural Science Foundation of China (NSFC) 91735304
Submitter Xingming Hu (huxingmingx@126.com)
Organization Anhui Agricultural University
Submission date 2024-03-09

Project Data

Resource name Description
BioSample (5) -
SAMC3480937 mir156oe
SAMC3480936 lhp1
SAMC3480935 wt
SAMC3480934 lhp1_H3K27me3
SAMC3480933 wt_H3K27me3
GSA (1) -
CRA015585 The heterochronic gene Oryza sativa LIKE HETEROCHROMATIN PROTEIN 1 modulates miR156b/c/i/e levels