项目编号 PRJCA024321
项目标题 RNA-seq of Krt32 knockout and wildtype mice dermal response to TNF-α Stimulation
涉及领域 Medical
数据类型 Transcriptome or Gene expression
物种名称 Mus musculus
描述信息 To characterize the transcriptome landscape of Krt32 knockout and wildtype mice dermal response to TNF-α Stimulation, six C57BL/6J mice, each of Krt32 wild-type and knockout (KO), were subcutaneously injected with TNF-α at a dose of 6 ug/kg/day body weight into their shaved dorsal skin for a duration of 48 hours. After two days of TNF-α treatment, the dorsal skin of Krt32(-/-) mice exhibited pronounced thickening and extensive yellow scaling, resembling the cutaneous manifestations observed in human patients with pityriasis rubra pilaris (PRP). Furthermore, Krt32(-/-) mice exhibited a thickened epidermis, hyperkeratosis with focal parakeratosis, and mild lymphocyte infiltration in the superficial dermis compared to their wild-type counterparts. These observations were confirmed by hematoxylin-eosin staining of dorsal skin lesion sections. Next, the dorsal skin was separated using a scalpel (tissue size of 0.5cm x 0.5cm) and homogenized in RNA lysate reagent (LS1040, Promega) with the assistance of Gentle MACS Octo Dissociator (Miltenyi Biotec, Bergisch Gladbach, Germany). RNA quality was examined by gel electrophoresis and with Qubit (Thermo, Waltham, MA, USA). Sequencing was carried out using the Illumina Novaseq 6000 instrument by the commercial service of Genergy Biotechnology Co., Ltd. (Shanghai, China).
样品范围 Multiisolate
发布日期 2024-03-18
出版信息
PubMed ID 文章标题 杂志名称 Doi 发表年份
39048559 Loss-of-function mutations in Keratin 32 gene disrupt skin immune homeostasis in pityriasis rubra pilaris Nature Communications 10.1038/s41467-024-50481-z 2024
项目资金来源
机构 项目类型 授权项目ID 授权项目名称
the Key research and development program of Shandong Province 2021LCZX07
提交者 Hong Liu (hongyue2519@hotmail.com)
提交单位 Shandong Provincial Hospital for Skin Diseases & Shandong Provincial Institute of Dermatology and Veneorology, Shandong First Medical University & Shandong Academy of Medical Sciences
提交日期 2024-03-14

项目包含数据信息

资源名称 描述
BioSample (16)  show -
GSA (1) -
CRA015401 RNA-seq of Krt32 knockout and wildtype mice dermal response to TNF-alpha Stimulation