项目编号 PRJCA024774
项目标题 Tri-omic single-cell mapping of the 3D epigenome and transcriptome in whole mouse brains throughout the lifespan
涉及领域 Model organism
数据类型 Epigenomics
Transcriptome or Gene expression
Single cell sequencing
物种名称 Mus musculus
Homo sapiens
描述信息 We developed ChAIR, a high-throughput approach to simultaneously assess chromatin accessibility, chromatin interactions, and RNA expression, in single cells. We use ChAIR to identify a temporal and causal mechanism that links 3D epigenome remodeling and transcriptional regulation in mammalian cells.
样品范围 Single cell
发布日期 2025-05-07
出版信息
PubMed ID 文章标题 杂志名称 Doi 发表年份
40301621 Tri-omic single-cell mapping of the 3D epigenome and transcriptome in whole mouse brains throughout the lifespan Nature Methods 10.1038/s41592-025-02658-7 2025
41399633 geomeTriD: a Bioconductor package for interactive and integrative visualization of 3D structural model with multi-omics data Bioinformatics Advances 10.1093/bioadv/vbaf299 2025
项目资金来源
机构 项目类型 授权项目ID 授权项目名称
National Natural Science Foundation of China (NSFC) 32250710678
National Natural Science Foundation of China (NSFC) 32400426
提交者 Xingyu Huang (huang182@live.cn)
提交单位 Zhejiang University
提交日期 2024-03-28

项目包含数据信息

资源名称 描述
BioSample (123)  show -
GSA (1) -
CRA015673 Tri-omic single cell mapping of 3D epigenome and transcriptome in whole mouse brains throughout lifespan