Accession PRJCA027062
Title Resequencing data used for QTL mapping of the genes BjA06.GL1 and BjB02.GL1 that control the formation of trichomes
Relevance Agricultural
Data types Whole genome sequencing
Raw sequence reads
Organisms Brassica juncea var. crispifolia
Brassica juncea
Description The main research objectives of this project mainly include: accurately locating the key genes BjA06.GL1 and BjB02.GL1 that control the formation of trichomes.The relevant information submitted by this project mainly covers the important data resources used for locating trichomes. For the parent, 30 plants with equal amounts of young and tender leaves were selected respectively to construct the trichome pool (H2 bulks) and the glabrous pool (H177 bulks), and for the F2 generation, also 30 plants with equal amounts of young and tender leaves were selected respectively to construct the Leaf with trichome bulks (LTBs) and the Leaf with glabrous (LGBs). Samples from the two parental line and two F2 segregating pools were used to extract Genomic DNA. Re-sequencing of the four DNA pools were performed with Illumina NovaSeq 6000 platforms by Biomarker Technologies (Beijing, China).
Sample scope Multiisolate
Release date 2025-05-10
Grants
Agency program Grant ID Grant title
National Natural Science Foundation of China (NSFC) Young Scientists Fund 32002056 Gene function analysis of lobed leaf gene BjRCO and molecular mechanisms of it regulate leaf shape variation in Brassica juncea
Submitter Shuangping Heng (shuangpingheng@126.com)
Organization Xinyang Normal university
Submission date 2024-06-14

Project Data

Resource name Description
BioSample (4) -
SAMC3877738 DNA sequencing of LGBs
SAMC3877737 DNA sequencing of LTBs
SAMC3877736 DNA sequencing of H177 bulks
SAMC3877735 DNA sequencing of H2 bulks
GSA (1) -
CRA017217 Resequencing data used for QTL mapping of the genes BjA06.GL1 and BjB02.GL1 that control the formation of trichomes