Accession PRJCA027535
Title Identification and Function of Key Metabolites in Organogenesis
Relevance Medical
Data types Transcriptome or Gene expression
Raw sequence reads
Mass Spectrometry Data
Organisms Mus musculus
Homo sapiens
Description The process of embryonic stem cells differentiating into the outer, middle, and inner germ layers, along with the identification of major cytokines, signaling pathways, and transcription factors involved in the subsequent differentiation of these germ layers into neural cells and hepatocytes, has been relatively well-established. Research reports, including our prior findings, have indicated that cell metabolism plays a pivotal role in the self-renewal and fate determination of pluripotent stem cells. Nevertheless, the precise mechanisms underlying the influence of metabolites on the maintenance of stem cell pluripotency and its differentiation process remain largely elusive. This project aims to delve deeper into this phenomenon by examining embryonic stem cells, induced pluripotent stem (iPS) cells, and cells or organoids at various stages of differentiation towards neural and hepatocyte lineages. Our objectives are to identify key metabolic intermediates and pathways that govern the maintenance of pluripotency and differentiation into neural or hepatocyte cells, elucidate the specific molecular mechanisms underlying their regulation, and investigate the role of mitochondria-related proteins in the maintenance of stem cell pluripotency and their differentiation into neural tube and hepatocyte cells. To achieve these goals, we will construct knockout mouse models targeting key metabolic enzymes or mitochondria-related proteins, as well as mouse models derived from haploid stem cells, to validate the functional roles of these key metabolites, pathways, and mitochondria-related proteins in vivo.
Sample scope Monoisolate
Release date 2024-06-29
Publication
PubMed ID Article title Journal name DOI Year
34146461
33402389
34472622
35217990
31562192
35433434
34601503
Grants
Agency program Grant ID Grant title
Ministry of Science and Technology of the People's Republic of China (MOST) National Key Technologies R&D Program 2018YFA0800300
Accessions in other database
Accession Database name
GSE172182 NCBI
GSE151952 NCBI
GSE181521 NCBI
GSE137439 NCBI
PXD027017 EBI
Submitter Ping Gao (pgao2@ustc.edu.cn)
Organization South China University of Technology
Submission date 2024-06-29

Project Data

Resource name Description
BioSample (5) -
SAMC3957500 V6.5_shGLDC
SAMC3957499 V6.5_NTC
SAMC3957498 V6.5
SAMC3957497 IPS
SAMC3957496 MEF
GSA (1) -
CRA017484 Identification and Function of Key Metabolites in Organogenesis