项目编号

PRJCA027641

项目标题

Time-series ATAC-seq and corresponding RNA-seq data from rice roots within 2 hours after N resupply

涉及领域

Agricultural

数据类型

Epigenomics
Transcriptome or Gene expression

物种名称

Oryza sativa

描述信息

Nitrogen (N) is a crucial nutrient for rice growth and yield. However, the transcriptional regulatory mechanisms underlying N response in rice remain elusive. Here, we integrated time-series chromatin accessibility (ATAC-seq) and transcriptome (RNA-seq) data to comprehensively investigate the dynamics of transcriptional regulation in rice roots resupplied with ammonium nitrate under N-deprived pretreatment conditions.

样品范围

Multiisolate

发布日期

2025-05-30

出版信息

PubMed ID	文章标题	杂志名称	Doi	发表年份
40468596	Chromatin accessibility dynamics and transcriptional regulatory networks underlying the primary nitrogen response in rice roots	Plant Communications	10.1016/j.xplc.2025.101392	2025

项目资金来源

机构	项目类型	授权项目ID	授权项目名称
National Natural Science Foundation of China (NSFC)		U23A20189
National Natural Science Foundation of China (NSFC)		32261143466

提交者

Wenhui Li (1443440194@qq.com)

提交单位

National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University

提交日期

2024-07-02

项目包含数据信息

资源名称	描述
BioSample (103) show	-
SAMC3967239	ATAC-seq of rice roots
SAMC3967238	ATAC-seq of rice roots
SAMC3967237	ATAC-seq of rice roots
SAMC3967236	ATAC-seq of rice roots
SAMC3967235	ATAC-seq of rice roots
SAMC3967234	ATAC-seq of rice roots
SAMC3967233	ATAC-seq of rice roots
SAMC3967232	ATAC-seq of rice roots
SAMC3967231	ATAC-seq of rice roots
SAMC3967230	ATAC-seq of rice roots
SAMC3967229	ATAC-seq of rice roots
SAMC3967228	ATAC-seq of rice roots
SAMC3967227	ATAC-seq of rice roots
SAMC3967226	ATAC-seq of rice roots
SAMC3967225	ATAC-seq of rice roots
SAMC3967224	ATAC-seq of rice roots
SAMC3967223	ATAC-seq of rice roots
SAMC3967222	ATAC-seq of rice roots
SAMC3967221	ATAC-seq of rice roots
SAMC3967220	ATAC-seq of rice roots
SAMC3967219	ATAC-seq of rice roots
SAMC3967218	ATAC-seq of rice roots
SAMC3967217	ATAC-seq of rice roots
SAMC3967216	ATAC-seq of rice roots
SAMC3967215	ATAC-seq of rice roots
SAMC3967214	ATAC-seq of rice roots
SAMC3967213	ATAC-seq of rice roots
SAMC3967212	ATAC-seq of rice roots
SAMC3967211	ATAC-seq of rice roots
SAMC3967210	ATAC-seq of rice roots
SAMC3967209	ATAC-seq of rice roots
SAMC3967208	ATAC-seq of rice roots
SAMC3967207	ATAC-seq of rice roots
SAMC3967206	ATAC-seq of rice roots
SAMC3967205	ATAC-seq of rice roots
SAMC3967204	ATAC-seq of rice roots
SAMC3967203	ATAC-seq of rice roots
SAMC3967202	ATAC-seq of rice roots
SAMC3967201	ATAC-seq of rice roots
SAMC3967200	ATAC-seq of rice roots
SAMC3967199	ATAC-seq of rice roots
SAMC3967198	ATAC-seq of rice roots
SAMC3967197	ATAC-seq of rice roots
SAMC3967196	ATAC-seq of rice roots
SAMC3967195	ATAC-seq of rice roots
SAMC3967194	ATAC-seq of rice roots
SAMC3967193	ATAC-seq of rice roots
SAMC3967192	ATAC-seq of rice roots
SAMC3967191	ATAC-seq of rice roots
SAMC3967190	ATAC-seq of rice roots
SAMC3967189	ATAC-seq of rice roots
SAMC3967188	ATAC-seq of rice roots
SAMC3967187	RNA-seq of rice roots
SAMC3967186	RNA-seq of rice roots
SAMC3967185	RNA-seq of rice roots
SAMC3967184	RNA-seq of rice roots
SAMC3967183	RNA-seq of rice roots
SAMC3967182	RNA-seq of rice roots
SAMC3967181	RNA-seq of rice roots
SAMC3967180	RNA-seq of rice roots
SAMC3967179	RNA-seq of rice roots
SAMC3967178	RNA-seq of rice roots
SAMC3967177	RNA-seq of rice roots
SAMC3967176	RNA-seq of rice roots
SAMC3967175	RNA-seq of rice roots
SAMC3967174	RNA-seq of rice roots
SAMC3967173	RNA-seq of rice roots
SAMC3967172	RNA-seq of rice roots
SAMC3967171	RNA-seq of rice roots
SAMC3967170	RNA-seq of rice roots
SAMC3967169	RNA-seq of rice roots
SAMC3967168	RNA-seq of rice roots
SAMC3967167	RNA-seq of rice roots
SAMC3967166	RNA-seq of rice roots
SAMC3967165	RNA-seq of rice roots
SAMC3967164	RNA-seq of rice roots
SAMC3967163	RNA-seq of rice roots
SAMC3967162	RNA-seq of rice roots
SAMC3967161	RNA-seq of rice roots
SAMC3967160	RNA-seq of rice roots
SAMC3967159	RNA-seq of rice roots
SAMC3967158	RNA-seq of rice roots
SAMC3967157	RNA-seq of rice roots
SAMC3967156	RNA-seq of rice roots
SAMC3967155	RNA-seq of rice roots
SAMC3967154	RNA-seq of rice roots
SAMC3967153	RNA-seq of rice roots
SAMC3967152	RNA-seq of rice roots
SAMC3967151	RNA-seq of rice roots
SAMC3967150	RNA-seq of rice roots
SAMC3967149	RNA-seq of rice roots
SAMC3967148	RNA-seq of rice roots
SAMC3967147	RNA-seq of rice roots
SAMC3967146	RNA-seq of rice roots
SAMC3967145	RNA-seq of rice roots
SAMC3967144	RNA-seq of rice roots
SAMC3967143	RNA-seq of rice roots
SAMC3967142	RNA-seq of rice roots
SAMC3967141	RNA-seq of rice roots
SAMC3967140	RNA-seq of rice roots
SAMC3967139	RNA-seq of rice roots
SAMC3967138	RNA-seq of rice roots
SAMC3967137	RNA-seq of rice roots
GSA (1)	-
CRA017541	Time-series ATAC-seq and corresponding RNA-seq data from rice roots within 2 hours after N resupply