项目编号 PRJCA029203
项目标题 Chromosome-level and haplotype-resolved assembly of Bougainvillea glabra
涉及领域 Agricultural
数据类型 Assembly
物种名称 Bougainvillea
描述信息 Bougainvillea. glabra Choisy, a common perennial shrub or climbing vine in tropical and subtropical areas, has significant ornamental and ecological value due to its immensely showy, floriferous blooms and multiple stresses adaptability. In this study, based on PacBio and Hi-C sequencing data, we presented the haplotype-resolved, and chromosome-level assembled genomes for B. glabra (2n=34). We totally get two haplotypes with genome size from 2,855,692,602 to 2,889,511,499 bp, N50 of 165~167 Mbp, and both anchored to 17 pseudochromosomes with anchor ratio of 97.07% and 97.55% respectively. Through the BUSCO evaluation process, the two assembled haplotypes both exhibited the high score of 96%. By combining the high-confidence different evidence of genome structure annotation pipeline we annotated each haplotype containing ~33,000 predicted genes, of which 86% were functionally annotated by different databases. These high-quality haplotypes assembly and annotation results will serve as a great genomic resource to explore the ornamental traits and environmental adaptability and accelerate improvement in future.
样品范围 Monoisolate
发布日期 2024-10-04
项目资金来源
机构 项目类型 授权项目ID 授权项目名称
Tropical Crops Genetic Resources Institute / National Key Laboratory for Tropical Crop Breeding, Chinese Academy of Tropical Agricultural Sciences 1630032018005 Special Basic Research Fund for Nonprofit Central Public Research Institutes
提交者 Lan Lan (309841175@qq.com)
提交单位 AGIS
提交日期 2024-08-16

项目包含数据信息

资源名称 描述
BioSample (1) -
SAMC4074172 Bougainvillea glabra
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