项目编号

PRJCA030413

项目标题

Metatranscriptomic data of murid animals (rodents and shrews) in Hubei Province in 2021

涉及领域

Environmental

数据类型

Transcriptome or Gene expression

物种名称

rodent metagenome

描述信息

Systematic virome profiling of these small mammals is essential for uncovering novel viruses, evaluating their zoonotic risks, and identifying key species and regions that contribute to viral spread. This study aims to address these gaps by employing high-throughput sequencing to profile the virome of wild small mammals in Central China. We conducted high-throughput sequencing on 1,113 small mammals collected from 97 townships across seven cities in Hubei Province during 2021

样品范围

Environment

发布日期

2024-09-26

出版信息

PubMed ID	文章标题	杂志名称	Doi	发表年份
40033356	Virome landscape of wild rodents and shrews in Central China	Microbiome	10.1186/s40168-025-02059-0	2025

数据提供者

数据提供者	数据提供者的网站链接
Bing Hu	https://www.hbcdc.cn/
Kun Cai	https://www.hbcdc.cn/

项目资金来源

机构	项目类型	授权项目ID	授权项目名称
Ministry of Science and Technology of the People's Republic of China (MOST)	National Key Technologies R&D Program	2023YFC2605504

提交者

Nailou Zhang (zhangnailou@foxmail.com)

提交单位

Wuhan Institute of Virology, Chinese Academy of Sciences

提交日期

2024-09-23

项目包含数据信息

资源名称	描述
BioSample (30) show	-
SAMC4154575	RNAseq:pool sampes from Apodemus agrarius, Mus musculus, Niviventer confucianus, Rattus norvegicus, Rattus tanezumi, Sorex araneus Linnaeus in Yichang--YC6
SAMC4154574	RNAseq:pool sampes from Apodemus agrarius, Mus musculus, Niviventer confucianus, Rattus norvegicus, Rattus tanezumi, Sorex araneus Linnaeus in Yichang--YC5
SAMC4154573	RNAseq:pool sampes from Apodemus agrarius, Mus musculus, Niviventer confucianus, Rattus norvegicus, Rattus tanezumi, Sorex araneus Linnaeus in Yichang--YC4
SAMC4154572	RNAseq:pool sampes from Apodemus agrarius, Mus musculus, Niviventer confucianus, Rattus norvegicus, Rattus tanezumi, Sorex araneus Linnaeus in Yichang--YC3
SAMC4154571	RNAseq:pool sampes from Apodemus agrarius, Mus musculus, Niviventer confucianus, Rattus norvegicus, Rattus tanezumi, Sorex araneus Linnaeus in Yichang--YC2
SAMC4154570	RNAseq:pool sampes from Apodemus agrarius, Mus musculus, Niviventer confucianus, Rattus norvegicus, Rattus tanezumi, Sorex araneus Linnaeus in Yichang--YC1
SAMC4154569	RNAseq:pool sampes from Apodemus agrarius, Mus musculus, Niviventer confucianus, Rattus norvegicus, Rattus tanezumi, Sorex araneus Linnaeus in Xiangyang--XY
SAMC4154568	RNAseq:pool sampes from Apodemus agrarius, Mus musculus, Niviventer confucianus, Rattus norvegicus, Rattus tanezumi, Sorex araneus Linnaeus in Xianning--XN4
SAMC4154567	RNAseq:pool sampes from Apodemus agrarius, Mus musculus, Niviventer confucianus, Rattus norvegicus, Rattus tanezumi, Sorex araneus Linnaeus in Xianning--XN3
SAMC4154566	RNAseq:pool sampes from Apodemus agrarius, Mus musculus, Niviventer confucianus, Rattus norvegicus, Rattus tanezumi, Sorex araneus Linnaeus in Xianning--XN2
SAMC4154565	RNAseq:pool sampes from Apodemus agrarius, Mus musculus, Niviventer confucianus, Rattus norvegicus, Rattus tanezumi, Sorex araneus Linnaeus in Xianning--XN1
SAMC4154564	RNAseq:pool sampes from Apodemus agrarius, Mus musculus, Niviventer confucianus, Rattus norvegicus, Rattus tanezumi, Sorex araneus Linnaeus in Shiyan--SY7
SAMC4154563	RNAseq:pool sampes from Apodemus agrarius, Mus musculus, Niviventer confucianus, Rattus norvegicus, Rattus tanezumi, Sorex araneus Linnaeus in Shiyan--SY6
SAMC4154562	RNAseq:pool sampes from Apodemus agrarius, Mus musculus, Niviventer confucianus, Rattus norvegicus, Rattus tanezumi, Sorex araneus Linnaeus in Shiyan--SY5
SAMC4154561	RNAseq:pool sampes from Apodemus agrarius, Mus musculus, Niviventer confucianus, Rattus norvegicus, Rattus tanezumi, Sorex araneus Linnaeus in Shiyan--SY4
SAMC4154560	RNAseq:pool sampes from Apodemus agrarius, Mus musculus, Niviventer confucianus, Rattus norvegicus, Rattus tanezumi, Sorex araneus Linnaeus in Shiyan--SY3
SAMC4154559	RNAseq:pool sampes from Apodemus agrarius, Mus musculus, Niviventer confucianus, Rattus norvegicus, Rattus tanezumi, Sorex araneus Linnaeus in Shiyan--SY2
SAMC4154558	RNAseq:pool sampes from Apodemus agrarius, Mus musculus, Niviventer confucianus, Rattus norvegicus, Rattus tanezumi, Sorex araneus Linnaeus in Shiyan--SY1
SAMC4154557	RNAseq:pool sampes from Sorex araneus Linnaeus in 7 cities--Sa
SAMC4154556	RNAseq:pool sampes from Rattus tanezumi in 7 cities--Rt
SAMC4154555	RNAseq:pool sampes from Rattus norvegicus in 7 cities--Rn
SAMC4154554	RNAseq:pool sampes from Niviventer confucianus in 7 cities--Nn
SAMC4154553	RNAseq:pool sampes from Mus musculus in 7 cities--Mm
SAMC4154552	RNAseq:pool sampes from Apodemus agrarius, Mus musculus, Niviventer confucianus, Rattus norvegicus, Rattus tanezumi, Sorex araneus Linnaeus in Jingzhou--JZ2
SAMC4154551	RNAseq:pool sampes from Apodemus agrarius, Mus musculus, Niviventer confucianus, Rattus norvegicus, Rattus tanezumi, Sorex araneus Linnaeus in Jingzhou--JZ1
SAMC4154550	RNAseq:pool sampes from Apodemus agrarius, Mus musculus, Niviventer confucianus, Rattus norvegicus, Rattus tanezumi, Sorex araneus Linnaeus in Jingmen--JM2
SAMC4154549	RNAseq:pool sampes from Apodemus agrarius, Mus musculus, Niviventer confucianus, Rattus norvegicus, Rattus tanezumi, Sorex araneus Linnaeus in Jingmen--JM1
SAMC4154548	RNAseq:pool sampes from Apodemus agrarius, Mus musculus, Niviventer confucianus, Rattus norvegicus, Rattus tanezumi, Sorex araneus Linnaeus in Huangshi--HS2
SAMC4154547	RNAseq:pool sampes from Apodemus agrarius, Mus musculus, Niviventer confucianus, Rattus norvegicus, Rattus tanezumi, Sorex araneus Linnaeus in Huangshi--HS1
SAMC4154546	RNAseq:pool sampes from Apodemus agrarius in 7 cities--Aa
GSA (1)	-
CRA019228	Metatranscriptomic data of murid animals (rodents and shrews) in Hubei Province in 2021