项目编号 PRJCA030593
项目标题 Mining of oil content genes in recombinant maize inbred lines with introgression from temperate and tropical germplasm
涉及领域 Agricultural
数据类型 Variation
物种名称 Zea mays
描述信息 Abstract: The oil content of maize kernels is essential to determine its nutritional and economic value. A multiparent population (MPP) consisting of five recombinant inbred line (RIL) subpopu-lations was developed to elucidate the genetic basis of the total oil content (TOC) in maize. The MPP used the subtropical maize inbred lines CML312 and CML384, along with the tropical maize inbred lines CML395, YML46, and YML32 as the female parents, and Ye107 as the male parent. A ge-nome-wide association study (GWAS) was performed using 429 RILs of the multiparent population across three environments, employing 584,847 high-quality single nucleotide polymorphisms (SNPs). Furthermore, linkage analysis was performed in the five subpopulations to identify quan-titative trait loci (QTL) linked to TOC in maize. Through QTL mapping and GWAS, 18 QTLs and 60 SNPs, that were significantly associated with TOC were identified. Two novel candidate genes, Zm00001d029550 and Zm00001d029551, related to TOC in maize, located on chromosome 1 were reported, which have not been previously reported. These genes are involved in biosynthesis, lipid signal transduction, plant development and metabolism, and stress responses, potentially influ-encing maize TOC. Haplotype analysis revealed that Hap3 could be considered as an excellent haplotype for increasing TOC in maize by Zm00001d029550 and Zm00001d029551. A co-located SNP (SNP-75791466) on chromosome 1, located 5,648bp and 11,951bp downstream of the can-didate genes Zm00001d029550 and Zm00001d029551, respectively, was found to be expressed in various maize tissues. The highest expression was observed in embryos after pollination, indicating that embryos are the main tissue for oil accumulation in maize. This study provides a theoretical basis for understanding the genetic mechanisms underlying maize TOC and developing high-quality, high-oil maize varieties.
样品范围 Monoisolate
发布日期 2024-09-27
项目资金来源
机构 项目类型 授权项目ID 授权项目名称
Institute of Food Crops, Yunnan Academy of Agricultural Sciences, NA
提交者 Mengfei Shi (smf5040@163.com)
提交单位 Yunnan Academy of Agricultural Sciences
提交日期 2024-09-27

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