Accession PRJCA031422
Title Cross-species Single-cell Transcriptomics Reveals Neuronal Similarities and Heterogeneity in Amniote Pallium
Relevance Model organism
Data types Transcriptome or Gene expression
Raw sequence reads
Single cell sequencing
Organisms Macaca fascicularis
Description The amniote pallium, a vital component of the forebrain, has undergone considerable evolutionary divergence across species and is critical for a variety of functions including sensation, memory and learning. The relationship between pallial subregions in different species remain elusive, particularly regarding the identification of homologous neurons and their similar or distinct signatures. Here, we utilized single-nucleus RNA sequencing to examine over 130,000 nuclei from macaque (Macaca fascicularis) neocortex, alongside datasets from human (Homo sapiens), mouse (Mus musculus), zebra finch(Taeniopygia guttata), turtle (Chrysemys picta bellii), and lizard (Pogona vitticeps), for a cross-species comparison.
Sample scope Single cell
Release date 2024-10-23
Publication
PubMed ID Article title Journal name DOI Year
Cross-species Single-cell Transcriptomics Reveals Neuronal Similarities and Heterogeneity in Amniote Pallium ZOOLOGICAL RESEARCH 10.24272/j.issn.2095-8137.2024.102 2024
Grants
Agency program Grant ID Grant title
National Key Research and Development Program 2022YEF0203200
National Science and Technology Innovation 2030 Major Program STI2030-2021ZD0200100
National Key Research and Development Program 2018YFA0801400
National Key Research and Development Program 2021YFA0805100
External link
External link Link description
https://db.cngb.org/search/project/CNP0006075/ China National GeneBank DataBase: CNGBdb
Submitter Fubaoqian Huang (huangbaoqian@genomics.cn)
Organization BGI Research
Submission date 2024-10-21

Project Data

Resource name Description
BioSample (7)  show -
GSA (2) -
CRA019935 Cross-species Single-cell Transcriptomics Reveals Neuronal Similarities and Heterogeneity in Amniote Pallium:section 2
CRA019919 Cross-species Single-cell Transcriptomics Reveals Neuronal Similarities and Heterogeneity in Amniote Pallium