Accession PRJCA033553
Title Transcriptomics and epigenomics of E15.5 female germ cells
Relevance Model organism
Data types Epigenomics
Transcriptome or Gene expression
Raw sequence reads
Organisms Mus musculus
Description Epigenetic reprogramming is widespread and highly active during gametogenesis, which is usually involving in the expression of critical genes. The expression of genes couple with transcription activation, and the transcriptional regulation by transcription factors predetermines protein translation for biological processes. In this study, we found that EHMT1-mediated re-establishment played crucial roles in the progression of meiosis in female germ cells. EHMT1 deficient female mice were nearly infertile due to the arrest of zygotene in embryonic germ cells, which was caused by down-regulated expression of key meiotic genes. Furthermore, we identified transcription suppressor for meiotic genes by combining RNA-seq, Cut&Tag seq analysis of H3K9me2 and luciferase reporter assays.
Sample scope Monoisolate
Release date 2025-06-19
Publication
PubMed ID Article title Journal name DOI Year
40650982 Re-establishment of H3K9me2 eliminates the transcriptional inhibition of ST18 on meiotic genes and orchestrates female germ cell development Nucleic Acids Research 10.1093/nar/gkaf657 2025
41014638 Re-establishment of H3K9me2 eliminates the transcriptional inhibition of ST18 on meiotic genes and orchestrates female germ cell development Nucleic Acids Research 10.1093/nar/gkaf979 2025
Grants
Agency program Grant ID Grant title
National Natural Science Foundation of China (NSFC) 82171646
Beijing Natural Science Foundation Z240020
National R&D Program of China 2022YFA0806302
Submitter Yi Na Zhang (zhangyina22@mails.ucas.ac.cn)
Organization Key Laboratory of Organ Regeneration and Reconstruction, Institute of Zoology
Submission date 2024-12-11

Project Data

Resource name Description
BioSample (14)  show -
GSA (2) -
CRA021738 Raw data of transcriptomics for E15.5 famale germ cells
CRA021737 Raw data of H3K9me2 Cut&Tag analysis for E11.5-E15.5 female germ cells