Accession PRJCA034653
Title RNA-seq of Arabidopsis cell fractions
Relevance Agricultural
Data types Transcriptome or Gene expression
Organisms Arabidopsis thaliana
Description We sequenced Arabidopsis RNA from different cell fractions. Overall design: RNA-seq of chromatin (cb), nucleoplasm(np), cytoplasm (cyto) fractions (each 3 replicate). And two nanopore sequencing data for chromatin.
Sample scope Monoisolate
Release date 2025-01-06
Publication
PubMed ID Article title Journal name DOI Year
32541953 Post-transcriptional splicing of nascent RNA contributes to widespread intron retention in plants Nature Plants 10.1038/s41477-020-0688-1 2020
Grants
Agency program Grant ID Grant title
Ministry of Science and Technology of the People's Republic of China (MOST) 2019YFA0903903
Accessions in other database
Accession Database name
SRX7222201 NCBI
Submitter Jixian Zhai (zhaijx@sustech.edu.cn)
Organization Southern University of Science and Technology
Submission date 2025-01-06

Project Data

Resource name Description
BioSample (3) -
SAMC4537008 cb3
SAMC4537007 cb2
SAMC4537006 cb1
GSA (1) -
CRA021976 RNA-seq of Arabidopsis chromatin fractions