| Accession |
PRJCA039342 |
| Title |
High-quality genome assembly of Camellia pitardii |
| Relevance |
Agricultural |
| Data types |
Whole genome sequencing
Genome sequencing
Assembly
|
| Organisms |
Camellia pitardii
|
| Description |
In this study, we report the first High-quality genome assembly for C. pitardii, generated through integrated PacBio HiFi sequencing, ONT ultra-long sequencing, Hi-C and Illumina sequencing assembly technology. The final assembled genome was 2.63 Gb, with repetitive sequence proportion of 78.91% and contig N50 of 146.18 Mb. Based on the karyotype of the species (2n=30), The genomic sequences were anchored onto 15 chromosomes. Genome annotation identified 52,848 protein-coding genes, and 98.27% were functionally annotated. The High-quality T2 genome assembly contributes to the population genetic and evolutionary analysis of C. pitardii, while informing conservation strategies for wild Camellia germplasm. |
| Sample scope |
Monoisolate |
| Release date |
2025-04-27 |
| Biomaterial provider |
Chongqing Landscape and Gardening Research Institute |
| Grants |
| Agency |
program |
Grant ID |
Grant title |
| Chongqing Finance Bureau Special Project
|
|
N/A
|
|
|
|
| Submitter |
Zhiyuan
Lv (lvzhiyuan88@yeah.net)
|
| Organization |
Chongqing Landscape and Gardening Research Institute |
| Submission date |
2025-04-25 |
