| 项目编号 | PRJCA049225 | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 项目标题 | \(Pulsatilla\ chinensis\) (Bunge) Regel | ||||||||||||||||||||||||||||
| 涉及领域 | Agricultural | ||||||||||||||||||||||||||||
| 数据类型 |
Whole genome sequencing
Genome sequencing and assembly Raw sequence reads Genome sequencing Assembly |
||||||||||||||||||||||||||||
| 物种名称 | Pulsatilla chinensis | ||||||||||||||||||||||||||||
| 描述信息 | Pulsatilla chinensis (Bunge) Regel, a medicinal species in the genus Pulsatilla (Ranunculaceae), exhibits significant anti-inflammatory activity due to its abundant triterpenoid saponins, enhancing its medicinal value. All 483 known Pulsatilla species lack whole genome sequencing data, hindering research on their the utilization of genetic resources in the genus and investigations into their biosynthetic mechanisms.evolution and Ranunculaceae phylogeny. Here, we present the first chromosome-level genome assembly of P. chinensis. The assembly spans 6,588.76 Mb with a contig N50 of 4.28 Mb. Using PacBio sequencing and Hi-C scaffolding, 99.32% of sequences were anchored onto eight chromosomes. We annotated 41,786 protein-coding genes through ab initio prediction, homology alignment, and transcriptome evidence, with 98.77% functionally annotated via NR, GO, and KEGG databases.This assembly not only facilitates studies on the molecular mechanisms and biosynthesis of bioactive compounds in P. chinensis, but also supports the further enrichment and utilization of germplasm resources across the Ranunculaceae. | ||||||||||||||||||||||||||||
| 样品范围 | Monoisolate | ||||||||||||||||||||||||||||
| 发布日期 | 2025-11-09 | ||||||||||||||||||||||||||||
| 项目资金来源 |
|
||||||||||||||||||||||||||||
| 提交者 | ting wang (twang_sxau@163.com) | ||||||||||||||||||||||||||||
| 提交单位 | University of Electronic Science and Technology of China | ||||||||||||||||||||||||||||
| 提交日期 | 2025-10-25 |
| 资源名称 | 描述 |
|---|---|
| BioSample (1) | - |
| SAMC6025811 | (Pulsatilla\ chinensis\) (Bunge) Regel |