Accession PRJNA944211
Title Comparing the transcription level between fourth day and eighth day in Streptomyces avermitilis S0
Relevance Environmental
Data types Transcriptome or Gene expression
Sample scope Multiisolate
Organism Streptomyces avermitilis [Taxonomy ID: 33903]
Description Streptomyces avermitilis is a avermectin producer.Since the avermectin biosynthesis rate has a increased significantly in P3 fermentation stage( P1,24–96 h; P2:96–192 h, P3:192–240 h), but the sugar absorption rate decreased significantly in P3 fermentation stage, in order to improve the titer of avermectins, we conducted transcriptomic analysis of Streptomyces avermitilis S0 in fourth and eighth day, and selected native promoters with appropriate temple using to express sugar transporters. Overall design: We chose two time points in fourth and eighth day. The samples were collected at each time point named S0-4d, S0-8d.
External link
Link description
Organization IMCAS
Data Source NCBI

Project Data

Resource name Description
Experiment (4) -
SRX19662612 GSM7093701: P3 fermentation, S0, 4d, rep1; Streptomyces avermitilis; RNA-Seq
SRX19662613 GSM7093702: P3 fermentation, S0, 4d, rep2; Streptomyces avermitilis; RNA-Seq
SRX19662614 GSM7093703: P3 fermentation, S0, 8d, rep1; Streptomyces avermitilis; RNA-Seq
SRX19662615 GSM7093704: P3 fermentation, S0, 8d, rep2; Streptomyces avermitilis; RNA-Seq