Accession SAMC1372164
Accession in Other Database GSA-Human: HRS038843
Sample name gDNA_P7_LM2R2
Title liver metastase
Sample type Human sample
Organism Homo sapiens
Description whole genome sequence
Attributes *This sample record contains additional controlled-access information that is avaiable from GSA-Human by requesting study HRA000183 in the GSA-Human system.
Release date 2021-10-31
BioProject Accession PRJCA002751
Submitter Rui  Wang  (tangfuchou@pku.edu.cn)
Organization Peking University
Submission date 2023-06-17

Sample Data

Resource name Description
GSA-Human (1) -
HRA000183  (Controlled Access) Here, we adopted single-cell RNA-Seq to analyze 8,085 cells from matching adjacent normal tissues, primary tumors, and metastatic tumors of 11 metastatic colorectal cancer patients. Furthermore, for three of the patients, we combined single-cell RNA sequencing and single-cell point mutation identification by cDNA Sanger sequencing, which permit us to identify the important phenotypic differences between the cancer cells with and without critical point mutations in the same patient in vivo at single-cell resolution. The PPAR signaling pathway was activated in tumors, and inhibiting it could drastically inhibit the growth of CRC organoids in vitro. Notably, distinct origins of lymph nodes and liver metastases were verified by CNVs and mitochondrial mutation profiles at single-cell resolution. Our study elucidates strong heterogeneity of CRC as well as potential therapeutic target for CRC therapy.