Accession SAMC1896254
Accession in Other Database GSA-Human: HRS278504
Sample name S5-C-O-rep3
Title tumor derived organoid
Sample type Human sample
Organism Homo sapiens
Description single cell RNA-seq
Attributes *This sample record contains additional controlled-access information that is avaiable from GSA-Human by requesting study HRA001252 in the GSA-Human system.
Release date 2023-01-01
BioProject Accession PRJCA002751
Submitter Rui  Wang  (tangfuchou@pku.edu.cn)
Organization Peking University
Submission date 2023-06-18

Sample Data

Resource name Description
GSA-Human (1) -
HRA001252  (Controlled Access) We adopted single-cell RNA-Seq method to analyze 8,085 cells from matching adjacent normal tissues, primary tumors, and metastatic tumors of 11 metastatic colorectal cancer patients. Furthermore, for two of the patients, we combined single-cell RNA sequencing and single-cell point mutation identification by cDNA Sanger sequencing, which permit us to identify the important phenotypic differences between the cancer cells with and without critical point mutations in the same patient in vivo at single-cell resolution. The PPAR signaling pathway was activated in tumors, and inhibiting it could drastically inhibit the growth of CRC organoids in vitro. Notably, distinct origins of lymph nodes and liver metastases were revealed in the same patients, which were verified by both CNVs and mitochondrial mutation profiles at single-cell resolution. Our study elucidates molecular heterogeneity of CRC as well as potential therapeutic target for CRC therapy.