Accession SAMC1956643
Accession in Other Database GSA-Human: HRS308497
Sample name tagmentation_buffer_1
Title tagmentation buffer test-1
Sample type Human sample
Organism Homo sapiens
Description Tagmentation buffer test-1 for Fipresci-Seq
Attributes
Isolate not collected
Age
Biomaterial provider National Collection of Authenticated Cell Cultures (Shanghai, China)
Sex male
Tissue Kidney
Disease
Cell line
Cell subtype
Cell type
Culture collection
Development stage
Disease stage
Ethnicity
Health State
Karyotype
Phenotype
Population
Race
Type
Treatment
Collection date 2021-03-10
Custom attributes
Release date 2023-02-21
BioProject Accession PRJCA007160
Submitter yun  li  (jiangl@big.ac.cn)
Organization BIG
Submission date 2023-06-18

Sample Data

Resource name Description
GSA-Human (1) -
HRA001531  (Open Access) Single-cell RNA five-end-sequencing methods can simultaneously quantify gene expression and detect transcribed cis-regulatory elements (tCREs, mostly promoters and enhancers) in a single assay with no extra cost, which are critical for studies of gene regulation. To enable sample multiplexing and cost-effective single-cell RNA five-end-sequencing for millions of individual cells, here we develop an efficient, simple and flexible 'Five-prime end single-cell combinatorial indexing RNA-Seq (Fipresci-Seq)' approach. In this study, we benchmarked Fipresci-Seq on an interspecies mixture of human and mouse cells.
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