样本编号 SAMC2336557
外部数据库编号 GSA-Human: HRS809495
样品名称 1-month_heter_cortical_organoid
样本标题 1-month_heter_cortical_organoid
样品类型 Human sample
物种名称 Homo sapiens
描述信息 1-month cortical organoids derived from Ctcf heterozygous mutated H1 hESCs
样本属性
分离株名称 not collected
年龄
实验材料提供者 Yao Hongjie
性别 male
组织器官 cortical neuron
疾病名称
细胞系
细胞亚型
细胞类型
收集/保存方法
发育阶段
疾病分期
血统性(民族)
健康状况
核型
表型
人口
种族(人种)
类型
处理方法
采样日期 2022-12-30
用户自定义属性
发布日期 2024-05-08
项目编号 PRJCA012096
提交者 Hongjie  Yao  (yao_hongjie@gzlab.ac.cn)
提交单位 Guangzhou Institutes of Biomedicine and Health,Chinese Academy of Sciences
提交日期 2023-06-18

样本包含数据信息

资源名称 描述
GSA-Human (1) -
HRA003128  (Open Access) CCCTC-binding factor (CTCF) mutations cause intellectual impairment, developmental retardation, short stature, and mild cardiac malformations. However, the mechanism is still unknown. In this study, we constructed a mouse disease model harboring a clinically relevant CTCF missense mutation (R567W) and systematically analyzed the changes in transcriptome, CTCF binding and higher-order structure in several tissues by doing RNA-seq, snRNA-seq, ChIP-seq, BL-Hi-C experiments. Our data indicated that the homozygous CTCFR567W mutated mouse showed growth retardation, deficits in neural and cardiopulmonary development and lethality at birth. Mechanically, the CTCFR567W mutation globally weakened chromatin binding of CTCF, resulted in a rearrangement of the 3D genome structure and abnormal expression of cell-type specific genes. Together, We conclude that CTCF R567 plays a vital role in regulating normal development.
相关样本
Samples (2)