Accession SAMC2520767
Accession in Other Database GSA-Human: HRS545053
Sample name Mut.CU-REWIRE1.0-r3
Title C-to-U RNA editing
Sample type Human sample
Organism Homo sapiens
Description Replicate 3 of Mut.CU-REWIRE1.0
Attributes
Isolate not collected
Age
Biomaterial provider Zefeng Wang's Lab, SINH, 320 Yueyang Road, Shanghai, China
Sex not applicable
Tissue embryonic kidney
Disease
Cell line
Cell subtype
Cell type
Culture collection
Development stage
Disease stage
Ethnicity
Health State
Karyotype
Phenotype
Population
Race
Type
Treatment
Collection date 2020-07-01
Custom attributes
Release date 2023-01-20
BioProject Accession PRJCA014279
Submitter zefeng  wang  (wangzefeng@picb.ac.cn)
Organization Shanghai Institute of Nutrition and Health, CAS
Submission date 2023-06-18

Sample Data

Resource name Description
GSA-Human (1) -
HRA003839  (Open Access) Programmable base editing of RNA enables rewriting the genetic codes on specific sites. Current tools for specific RNA editing dependent on the assembly or recruitment of the guide RNA into an RNA/protein complex, which may cause delivery barrier and low editing efficiency. Here we report a new set of tools, RNA editing with individual RNA-binding enzyme (REWIRE), to perform precise base editing with a single engineered protein. The REWIRE system contains a human-originated programmable RNA-binding domain (PUF domain) to specifically recognize target sequence and different deaminase domains to achieve A-to-I or C-to-U editing. By utilizing this system, we have achieved editing efficiencies up to 80% in A-to-I editing and 65% in C-to-U editing, with a few non-specific editing sites in the targeted region and a low level off-target effect globally.