Accession SAMC3443792
Accession in Other Database GSA-Human: HRS1188215
Sample name K23048
Title Human_skin_7
Sample type Human sample
Organism Homo sapiens
Description transcriptome
Attributes
Isolate not collected
Age
Biomaterial provider SPHSD, Jinan,Shandong,CA
Sex male
Tissue skin
Disease
Cell line
Cell subtype
Cell type
Culture collection
Development stage
Disease stage
Ethnicity
Health State
Karyotype
Phenotype
Population
Race
Type
Treatment
Collection date 2023-12-20
Custom attributes
Release date 2024-03-15
BioProject Accession PRJCA024320
Submitter Hong  Liu  (hongyue2519@hotmail.com)
Organization Shandong Provincial Hospital for Skin Diseases & Shandong Provincial Institute of Dermatology and Veneorology, Shandong First Medical University & Shandong Academy of Medical Sciences
Submission date 2024-03-15

Sample Data

Resource name Description
GSA-Human (1) -
HRA006901  (Open Access) To characterize the transcriptome landscape of patients with PRP, the full-thickness skin tissues were collected and fixed in 10% buffered formalin, followed by embedding in paraffin wax, from six patients with PRP carrying KRT32 mutations and six age-, gender-, and site-matched healthy controls. The paraffin-embedded tissues were sectioned at a thickness of 10 micron using a rotary microtome. FFPE tissue sections were processed for RNA isolation using Deparaffinization Reagent and CAT5 Reagent. The NEBNext PolyA mRNA Magnetic Isolation Module and NEBNext Ultra II mRNA Library Prep Kit for Illumina were used for mRNA isolation and library construction following the manufacturers protocols. Finally, library molar concentration was determined using the KAPA Library Quant kit (illumina) universal qPCR Mix. And high-throughput transcriptome sequencing was performed on an Illumina NovaSeq6000 platform according to the instructions of manufacturer.
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