Accession SAMC477390
Sample name R1.ATAC.rep2
Title rep2 of ATAC-seq of R1 cells
Sample type Model organism or animal sample
Organism Mus musculus
Description Aliqouts of 50,000 cells were combined with washed Concanavalin A coated magnetic beads (BioMagPlus, BP531), and incubated with specific antibody in digitonin condition. Then, cells were incubated and fragmented by recombinant Protein-A Tn5 transposome. The tagmented DNA was collected and purified for setting up DNA libraries.
Attributes
Breed
Strain
Age 2 Month(s)
Biomaterial provider Institute of Biophysics
Sex male
Tissue R1 cell
Birth date
Birth location
Breed history
Breed method
Cell line
Cell subtype
Cell type
Collected by
Culture collection
Death date
Development stage
Disease
Disease stage
Genotype
Geographic location
Growth protocol
Health state
Isolation source
Latitude and longitude
Phenotype
Type
Specimen voucher
Storage conditions
Stud book number
Treatment
Release date 2021-11-05
BioProject Accession PRJCA004722
Submitter Liwei  Zhang  (lwzhanghz@ibp.ac.cn)
Organization Institute of Biophysics, Chinese Academy of Sciences
Submission date 2021-11-05

Sample Data

Resource name Description
GSA (1) -
CRA005318 H2A.Z deposition after the rescue of HIRA fragments and chromatin accessibility with HIRA deletion in mouse ESC