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SAMC496141
Accession
SAMC496141
Sample name
CERI-KRISP-K032238
Title
CERI-KRISP-K032238- NGS-SA Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) Omicron sequencing in South Africa
Sample type
Clinical or host-associated pathogen
Organism
Severe acute respiratory syndrome coronavirus 2
Description
SAMN23469678
Attributes
Isolate
CERI-KRISP-K032238
Strain
SARS-CoV-2
Collected by
National Health Laboratory Service
Collection date
2021-11-22
Geographic location
South Africa: Gauteng
Host
Homo sapiens
Host disease
COVID-19
Isolation source
Oropharyngeal swab
Latitude and longitude
26.01S 28.12E
Culture collection
genotype
Host age
Host description
Host disease stage
Host health state
Host sex
not applicable
Host subject id
Host tissue sampled
Passage history
Pathotype
Serotype
Serovar
Specimen voucher
Subgroup
Subtype
Release date
2021-12-01
BioProject Accession
PRJCA007411
Submitter
GSA GSA (gsa-submit@big.ac.cn)
Organization
KwaZulu-Natal Research Innovation and Sequencing Platform-UKZN
Submission date
2021-12-01
Sample Data
Resource name
Description
GSA (1)
-
CRA005485
NGS-SA SARS-CoV-2 Omicron Sequencing in South Africa
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