Accession SAMC496142
Sample name CERI-KRISP-K032239
Title CERI-KRISP-K032239- NGS-SA Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) Omicron sequencing in South Africa
Sample type Clinical or host-associated pathogen
Organism Severe acute respiratory syndrome coronavirus 2
Description SAMN23469679
Attributes
Isolate CERI-KRISP-K032239
Strain SARS-CoV-2
Collected by National Health Laboratory Service
Collection date 2021-11-22
Geographic location South Africa: Gauteng
Host Homo sapiens
Host disease COVID-19
Isolation source Oropharyngeal swab
Latitude and longitude 26.01S 28.12E
Culture collection
genotype
Host age
Host description
Host disease stage
Host health state
Host sex not applicable
Host subject id
Host tissue sampled
Passage history
Pathotype
Serotype
Serovar
Specimen voucher
Subgroup
Subtype
Release date 2021-12-01
Accession PRJCA007411
Submitter GSA  GSA  (gsa-submit@big.ac.cn)
Organization KwaZulu-Natal Research Innovation and Sequencing Platform-UKZN
Submission date 2021-12-01

Sample Data

Resource name Description
GSA (1) -
CRA005485 NGS-SA SARS-CoV-2 Omicron Sequencing in South Africa
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