Accession SAMC5723998
Accession in Other Database GSA-Human: HRS1975468
Sample name CS12 embryo
Title cs12 embryos
Sample type Metagenome or environmental sample
Organism human metagenome
Description stereo-seq
Attributes *This sample record contains additional controlled-access information that is avaiable from GSA-Human by requesting study HRA012531 in the GSA-Human system.
Release date 2025-10-25
BioProject Accession PRJCA043628
Submitter KeLiang  Wu  (wukeliang_527@163.com)
Organization Shandong University
Submission date 2025-07-29

Sample Data

Resource name Description
GSA-Human (1) -
HRA012531  (Controlled Access) This study used high-resolution spatial multi-omics technology to draw a "panoramic picture" of organogenesis at the critical stage of human embryonic CS12. After slicing along the sagittal plane, six groups of adjacent tissues were subjected to HE staining, spatial transcriptome sequencing, and spatial metabolic mass spectrometry to achieve the integration of dual-modal data at the same point. The transcriptional regulation of 17 cell/tissue groups was analyzed by precise alignment using a graphical algorithm, combined with RNA rate, cell communication, and transcription factor regulatory networks; subgroups such as hepatocytes, cardiomyocytes, and skeletal muscle precursors were further subdivided to reveal the trajectory of developmental differentiation. Differential metabolism and gene-metabolism coupling analysis elucidate the energy and signal reprogramming in organ formation, providing key resources and frameworks for the study of innate developmental mechanisms and the causes of malformations.
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