|
assembly software
|
megahit 1.2.9
|
|
GUNC version
|
GUNC v1.0.6
|
|
broad-scale environmental context
|
missing: third party data
|
|
collection date
|
missing: third party data
|
|
number of contigs
|
313
|
|
sample derived from
|
SAMN10722195
|
|
geographic location (longitude)
|
missing: third party data
|
|
binning parameters
|
tetramer and coverage
|
|
contamination score
|
0.22
|
|
GUNC clade separation score
|
0.0
|
|
Submitter Id
|
spire_mag_01234436
|
|
taxonomic classification
|
d__Bacteria;p__Actinomycetota;c__Coriobacteriia;o__Coriobacteriales;f__Eggerthellaceae;g__Eggerthella;s__Eggerthella lenta
|
|
linked to SPIRE study
|
https://spire.embl.de/spire/v1/study/189
|
|
completeness software
|
CheckM2 v0.1.3
|
|
contig N50
|
12545
|
|
linked to SPIRE sample
|
https://spire.embl.de/spire/v1/sample/23346
|
|
SPIRE genome cluster
|
https://spire.embl.de/spire/v1/cluster/specI_v4_00274
|
|
geographic location (country and/or sea)
|
missing: third party data
|
|
ENA-CHECKLIST
|
ERC000047
|
|
binning software
|
metaBAT2 v2.12.1
|
|
linked to analysis project
|
ERP174207
|
|
sample name
|
spire_mag_01234436
|
|
assembly quality
|
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
|
|
GUNC reference representation score
|
0.95
|
|
taxonomic identity marker
|
multi-marker approach
|
|
scientific_name
|
Eggerthella lenta
|
|
completeness score
|
93.47
|
|
environmental medium
|
missing: third party data
|
|
geographic location (latitude)
|
missing: third party data
|
|
taxonomic classification software
|
GTDBtk v2.3.2_r214
|
|
SPIRE genome id
|
https://spire.embl.de/spire/v1/genome/spire_mag_01234436
|
|
ENA first public
|
2025-10-06
|
|
GUNC contamination score
|
0.0
|
|
INSDC status
|
public
|
|
local environmental context
|
missing: third party data
|
|
MAG coverage software
|
bwa mem
|
|
project name
|
SPIRE v1: a Searchable Planetary-scale mIcrobiome REsource
|
|
metagenomic source
|
metagenomes
|
|
derived from assembly
|
ERZ27238429
|
|
INSDC center name
|
EMBL Heidelberg
|
|
isolation_source
|
missing: third party data
|
