Accession SAMN30916475
Title CDC Sars CoV2 Sequencing Baseline Constellation
Organism Severe acute respiratory syndrome coronavirus 2
Sample type SARS-CoV-2.cl.1.0
Attributes
host_disease COVID-19
collection_date 2022-09-07
diagnostic_pcr_Ct_value_1 Unknown
diagnostic_pcr_Ct_value_2 Unknown
diagnostic_pcr_Ct_value_3 Unknown
collection_device Nasal swab
collected_by 'Helix'
purpose_of_sequencing baseline surveillance (random sampling)
diagnostic_gene_name_2 ORF1ab
diagnostic_gene_name_3 S
diagnostic_pcr_protocol_3 Helix COVID-19 and Flu Test
host_age 66
diagnostic_gene_name_1 N
host_sex male
host_race White
lineage/clade name BA.5.5
diagnostic_pcr_protocol_1 Helix COVID-19 and Flu Test
diagnostic_pcr_protocol_2 Helix COVID-19 and Flu Test
host Homo sapiens
collection_method Nasal swab
Isolate SARS-CoV-2/Human/USA/AL-CDC-STM-GT23XX96F/2022
geo_loc_name USA: Alabama
isolation_source nasal swab
Organization CDC-OAMD
Release date 2022-09-19
Data Source NCBI