Total Holdings
Total Holdings Released Samples Confidential Samples Controlled Samples
369259 238808 97827 32624
Grants
Agencies Samples
Chinese Academy of Sciences (CAS) 33628
Ministry of Science and Technology of the People's Republic of China (MOST) 32341
National Natural Science Foundation of China (NSFC) 141756
Other 268
Sample Types
Sample Types Samples
Plant 79400
Human 44536
Animals 39082
Metagenome or environmental 25591
Clinical or host-associated pathogen 14865
Environmental/Metagenome Genomic Sequences MIMS.me -- human-gut 14088
Environmental/Metagenome Genomic Sequences MIMS.me -- soil 10472
Microbe 7577
Environmental/Metagenome Genomic Sequences MIMS.me -- water 1738
Environmental, food or other pathogen 1307
Virus 152
Organisms
Organisms Samples
Homo sapiens 45504
Mus musculus 14550
Bacteria 10442
Oryza sativa 18444
soil metagenome 6995
Arabidopsis thaliana 1027
human gut metagenome 16555
Microbiota 7961
Severe acute respiratory syndrome coronavirus 2 7498
Gallus gallus 2277
Zea mays 6556
Triticum aestivum 6940
Sus scrofa 1434
Glycine max 6753
Bos taurus 1079
Solanum lycopersicum 612
Anas platyrhynchos 1412
Rattus norvegicus 925
Mus 244
Fungi 1980
Danio rerio 302
Brassica napus 3638
Saccharomyces cerevisiae 269
metagenome 1128
Escherichia coli 243
Drosophila melanogaster 164
Camellia sinensis 1453
gut metagenome 583
Populus tomentosa 955
Solanum tuberosum 3741
Macaca fascicularis 471
Canis lupus familiaris 2502
Ovis aries 2847
Capra hircus 608
Aegilops tauschii 227
Gossypium hirsutum 222
Macaca mulatta 258
Prunus mume 106
Populus 954
Sorghum bicolor 616
Cucumis sativus 747
Triticum urartu 1768
Oryza sativa Japonica Group 128
Setaria italica 107
mouse gut metagenome 384
Hevea brasiliensis 50
Ipomoea batatas 2151
Staphylococcus aureus 648
Klebsiella pneumoniae 487
Nicotiana tabacum 123
Camellia sinensis var. sinensis 356
Fagopyrum tataricum 276
Ginkgo biloba 146
Canis lupus 120
Archaea 682
Cyprinus carpio 94
Mycobacterium tuberculosis 2811
feces metagenome 91
Salvia miltiorrhiza 121
Rattus 143
Panax notoginseng 1128
Eriobotrya japonica 140
sediment metagenome 138
Arabidopsis 71
Populus qiongdaoensis 34
Scophthalmus maximus 49
Brassica rapa 532
Populus simonii 138
Medicago sativa 376
Gallus 2054
marine metagenome 89
Populus alba 120
Oryza rufipogon 418
Drosophila 111
Grus nigricollis 33
Ctenopharyngodon idella 212
Babesia motasi 6
Neolamarckia cadamba 198
Camellia sinensis var. assamica 78
Triticum turgidum 404
Populus x canadensis 22
Saccharum officinarum 254
Penaeus vannamei 90
root metagenome 2029
Brassica carinata 24
Pyrus pyrifolia 13
Ailuropoda melanoleuca 32
Benincasa hispida 166
Camellia oleifera 65
rat gut metagenome 120
Anser indicus 15
Epinephelus lanceolatus 201
Populus euphratica 79
Populus davidiana 127
Populus adenopoda 77
Apium graveolens 103
Triticum dicoccoides 91
Dendrobium officinale 42
Tamarixia radiata 21
Capsicum 305
Medicago truncatula 24
plant metagenome 66
Actinidia chinensis 63
Hordeum vulgare 126
Eucommia ulmoides 19
Acinetobacter baumannii 33
Oryza 2459
Rehmannia glutinosa 29
Oryza longistaminata 10
human oral metagenome 2809
Felis catus 14
Juglans regia 205
Manihot esculenta 293
freshwater metagenome 115
Citrullus lanatus 272
Cinnamomum camphora 13
Bos grunniens 158
Lilium 27
Echinochloa crus-galli 623
Brassica oleracea 8
Populus tremula 38
Caenorhabditis elegans 50
Populus alba var. pyramidalis 29
Equus caballus 178
Cuscuta australis 18
Columba livia 22
Pyrrhocorax pyrrhocorax 12
Aegiceras corniculatum 31
Sus scrofa domesticus 159
Malus domestica 863
Coriandrum sativum 11
Oryza sativa Indica Group 22
Cyclocarya paliurus 22
Ophiocordyceps sinensis 3
Pinus tabuliformis 27
Populus wilsonii 44
Ixodes persulcatus 77
Avicennia marina 5
Norovirus 178
Capsicum annuum 357
human metagenome 717
Prunus armeniaca 5
Prunus persica 3
Triticum aestivum var. vavilovii 15
Vernicia fordii 18
Paeonia suffruticosa 40
Spinacia oleracea 9
Populus trichocarpa 15
Phaseolus vulgaris 5
Locusta migratoria 66
Epinephelus coioides 9
Populus deltoides 26
Zanthoxylum armatum 2
Scutellaria barbata 13
Larimichthys crocea 117
Boehmeria nivea 362
Stephania tetrandra 37
Prunus mira 56
Rosa chinensis 36
Bombyx mori 51
Thaumarchaeota 22
Triticum monococcum subsp. sinskajae 3
Populus tremula x Populus alba 33
Eospalax fontanierii baileyi 40
Juglans 846
Triticum turgidum subsp. paleocolchicum 9
Tetrahymena thermophila 9
Antheraea pernyi 11
Carica papaya 40
Allium sativum 235
Eriocheir sinensis 63
Tupaia chinensis 100
Davidia involucrata 2
Jasminum sambac 87
Poropuntius huangchuchieni 26
Passiflora edulis 8
Populus rotundifolia 45
Leonurus japonicus 12
Camellia 8
Enterobacteria phage phiX174 sensu lato 6
Nocardia farcinica 37
Kandelia obovata 7
human lung metagenome 192
Nycticebus bengalensis 63
Glycine soja 169
Saccharum spontaneum 69
Lotus japonicus 19
Triticum monococcum 171
Pseudomonas aeruginosa 20
Physcomitrium patens 9
Cenchrus purpureus 65
Oryza nivara 288
bacterium 48
Triticum ispahanicum 21
Apis mellifera 49
Nocardia cyriacigeorgica 78
Triticum petropavlovskyi 13
Apis cerana 24
Puccinellia tenuiflora 2
Cervus nippon 181
Castanea mollissima 40
Phrynocephalus vlangalii 32
Populus szechuanica 4
Avena nuda 19
Riptortus pedestris 2
Derris trifoliata 4
Alternaria alternata 22
Cladopus chinensis 7
Oreochromis niloticus 3
Haematococcus lacustris 2
Stipa purpurea 7
Medicago falcata 1
Malus prunifolia 5
Lactuca sativa 37
Pyricularia oryzae 2
Diaphorina citri 9
Plasmodium falciparum 39
Tephrosia purpurea 2
Paralichthys olivaceus 1
Rheum officinale 2
Acer pseudosieboldianum 2
Canis latrans 5
Populus nigra 4
Malus sargentii 7
Sapindus mukorossi 116
Oryza meyeriana var. granulata 9
Physalis pubescens 2
human vaginal metagenome 164
Dianthus chinensis 1
Eruca vesicaria subsp. sativa 2
Avena longiglumis 6
Pinctada imbricata 165
Lota lota 8
Rhipicephalus sanguineus 73
Komagataella pastoris 90
Euscaphis japonica 6
Escherichia coli K-12 14
metagenomes 127
Thinopyrum ponticum x Triticum aestivum 2
Bacillus subtilis 7
Magnolia officinalis 2
Ambystoma mexicanum 942
Micromonospora 2
Rheum palmatum 11
Pyrus betulifolia 2
Dendrobium nobile 1
Corylus ferox var. thibetica 3
Bergenia purpurascens 1
Lonicera japonica 19
Picea wilsonii 3
Malus sieboldii 6
Camellia atrothea 2
Tagetes erecta 25
Camellia ptilophylla 9
Coix lacryma-jobi 3
unidentified 20
Secale cereale 13
Corylus ferox 5
Lycopodium japonicum 1
Malus spectabilis 5
Rhipicephalus microplus 153
Nitrospirae 2
Diaphorencyrtus aligarhensis 9
Gobiocypris rarus 12
Bos indicus 195
Melaleuca alternifolia 2
Malus sieversii 23
Mangifera indica 39
Sonneratia alba 16
Taraxacum kok-saghyz 41
Thauera 111
Corylus heterophylla var. sutchuenensis 4
Camellia gymnogyna 3
Ananas comosus 15
Populus ilicifolia 5
Populus lasiocarpa 5
Clinopodium polycephalum 1
Polygonum cuspidatum 19
Chaenomeles thibetica 1
Bubalus bubalis 233
Acanthochlamys bracteata 113
Nephelium lappaceum 28
Schizothorax oconnori 16
Hypophthalmichthys molitrix 14
Malus toringoides 10
Lycium barbarum 17
lake water metagenome 29
Canna indica 243
Proteobacteria 31
Antiaris toxicaria 1
Actinidia deliciosa 38
Ovis aries musimon 4
Chaenomeles speciosa 1
Rhizophora apiculata 4
Cocos nucifera 145
Solanum melongena 151
Fusarium oxysporum f. sp. cubense 6
estuary metagenome 30
Lolium multiflorum 10
Channa argus 7
Lactiplantibacillus plantarum 2
Ipomoea aquatica 4
Populus yunnanensis 5
oral metagenome 520
Ailurus fulgens 66
Prunus sibirica 1
Chaetoceros muellerii 21
mixed sample 8
Scaevola taccada 11
Tetrahymena shanghaiensis 4
Arabis paniculata 3
Euryale ferox 2
Tamarix chinensis 2
Huperzia serrata 22
Bombyx mandarina 19
Malus floribunda 2
Manis javanica 13
Populus pruinosa 37
Arachis hypogaea 353
Malus asiatica 6
Rhodotorula toruloides 13
Wolfiporia cocos 4
Carassius auratus 97
Aurantiochytrium limacinum 37
Malus sikkimensis 4
Papaver somniferum 3
Nocardia beijingensis 5
synthetic metagenome 145
Malus rockii 2
Oryctolagus cuniculus 35
Hyalomma asiaticum 23
Malus baccata 9
pig gut metagenome 26
Ardisia crenata 2
Iris domestica 1
Dermacentor silvarum 136
Houttuynia cordata 2
Cucumis metulifer 51
Brassica rapa var. rapa 25
Camellia taliensis 3
Bos frontalis 5
Canis aureus 8
Rubus corchorifolius 102
Carassius auratus red var. 16
Medicago ruthenica 2
Isochrysis galbana 25
Enterobacter 7
activated sludge metagenome 13
Cyprinus carpio haematopterus 37
Populus trinervis 4
Anser sp. 3
Echinochloa colona 45
Corylus mandshurica 3
Nicotiana attenuata 54
Brassica rapa subsp. rapa 14
Spalax 12
Malus coronaria 6
Camellia sinensis var. pubilimba 29
Populus laurifolia 2
Talipariti tiliaceum 5
Triticum 2
Allium fistulosum 7
Nocardia brasiliensis 7
cellular organisms 33
Spinacia turkestanica 1
Chlamydomonas reinhardtii 1
Corylus yunnanensis 4
Macaca 587
Cannabis sativa 3
Cucumis melo 10
unidentified influenza virus 15
Crotalaria pallida 3
Trichogramma japonicum 8
Carpinus viminea 8
Ovis ammon 16
pond metagenome 51
Oreonectes daqikongensis 8
Monopterus albus 204
Melilotus albus 2
Artocarpus heterophyllus 19
Equus asinus 6
Plutella xylostella 22
Influenza A virus 39
Simmondsia chinensis 6
Nilaparvata lugens 11
Malus zumi 2
Olea europaea 7
Nanorana parkeri 62
Echinochloa oryzicola 103
Triticum turgidum subsp. durum 9
Ostryopsis davidiana 98
Gastrodia elata 4
Melilotus officinalis 1
Dendrobium huoshanense 15
Plectropomus leopardus 7
Epinephelus fuscoguttatus 146
Pyrus communis 2
Nanorana pleskei 1
Scutellaria baicalensis 2
Vaccinium corymbosum 28
Bos mutus 30
Nocardia asiatica 7
Corylus americana 4
Nocardia nova 7
Drosophila simulans 25
Prunus salicina 18
Prunus humilis 14
Medicago polymorpha 4
Andrias davidianus 21
Morus alba 13
Nocardia wallacei 6
Mus sp. 7
Malus domestica subsp. chinensis 29
Malus kansuensis 2
Populus fremontii 2
Phrynocephalus przewalskii 22
Antirrhinum majus 79
Candidatus Marinimicrobia 13
Nocardia abscessus 7
Chloroflexia 14
Oxygymnocypris stewartii 15
Aegilops tauschii subsp. strangulata 30
Cymbidium ensifolium 32
Saccharina japonica 49
Haemaphysalis longicornis 184
Sarcandra glabra 8
Medicago lupulina 1
Opsariichthys bidens 11
Echinochloa walteri 15
Malus micromalus 2
Malus mandshurica 2
Camellia azalea 11
Arctium lappa 3
Ostryopsis nobilis 27
Corchorus capsularis 1
Pseudomonas sp. 12
Nocardia otitidiscaviarum 16
Armillaria gallica 7
Trachypithecus poliocephalus 12
Echinochloa haploclada 18
Malus prattii 2
Panax ginseng 36
Ananas comosus var. bracteatus 2
Phlegmariurus 2
Chlorella variabilis 9
Verticillium dahliae 6
Helianthus annuus 15
Abutilon indicum 3
Acrostichum aureum 4
Cleistogenes songorica 1
Ficus microcarpa 2
Bat betacoronavirus 59
Oryza glaberrima 3
Penicillium simplicissimum 11
Bubalus carabanensis 2
Guilandina bonduc 3
Flavobacteriaceae bacterium 4
Nautilus pompilius 1
Aegilops speltoides 20
Acrostichum speciosum 4
Phalaenopsis mannii 1
Rhodospirillaceae bacterium 2
unidentified coronavirus 1
Pichia kudriavzevii 1
Fallopia multiflora var. ciliinervis 1
Gyps himalayensis 3
Streptomyces bingchenggensis 12
Nymphaea colorata 18
Dechloromonas sp. 1
Pseudomonas syringae 12
Capsicum chinense 10
Euphorbia pulcherrima 1
Cycas shiwandashanica 1
Daphnia pulex 1
Serratia marcescens 2
Anthocoridae 11
Scenedesmus armatus 3
Rhodospirillales bacterium 2
Apis mellifera ligustica 1
Bacillus pumilus 2
Chrysanthemum x morifolium 18
Pseudostellaria heterophylla 11
Uronema sp. 1
Nocardia asteroides 1
Acanthosomatidae 7
Curcuma wenyujin 4
Pistacia terebinthus subsp. palaestina 5
Guttera pucherani 1
Pinus sylvestris 1
Heritiera littoralis 4
Tetrabaena socialis 1
Capsicum flexuosum 1
insect gut metagenome 18
Panonychus citri 1
Valsa sordida 5
Nannoglottis ravida 1
Rangifer tarandus 1
Phytophthora litchii 1
Shinisaurus crocodilurus 38
Ancherythroculter nigrocauda 31
Oryza nivara x Oryza sativa 1
Prunus dulcis 36
Valsa mali 6
Potamochoerus porcus 2
Isatis tinctoria 6
chicken gut metagenome 35
Carpinus 4
Trifolium pratense 14
seawater metagenome 22
human skin metagenome 23
Ostrya virginiana 1
Shewanella sp. MR-7 1
Macadamia integrifolia 1
Crassostrea hongkongensis 25
Mangifera odorata 1
Palhinhaea 1
Corylus fargesii 2
Paralaudakia stoliczkana 1
Paelopatides 2
ANME-2 cluster 5
Oryza grandiglumis 2
Avena sativa 1
Ficus religiosa 2
Coreidae 22
Panicum miliaceum 1
Withania somnifera 1
Penicillium oxalicum 12
Paludibacter 1
Sturnira hondurensis 1
Janthinobacterium sp. 1
Capra ibex 1
Avena atlantica 1
Melilotus indicus 1
Artheneidae 1
Kluyveromyces marxianus 4
Phalaenopsis 1
Phlegmariurus carinatus 1
Maclura tricuspidata 1
Fluviicola sp. 2
Cyprinus carpio 'wuyuanensis' 1
Pseudomonas savastanoi pv. glycinea 2
Carpinus turczaninowii 1
Avena murphyi 1
Bombus breviceps 3
Callicarpa formosana 1
Aeromonas salmonicida 9
Bruguiera gymnorhiza 4
Phyla nodiflora 4
Rhodothermaceae bacterium 2
Urostylididae 4
Bacillus sp. (in: Bacteria) 1
Raphanus sativus var. niger 9
Jaagichlorella roystonensis 1
Nymphaea potamophila 1
Phycisphaerales bacterium 2
Rhodococcus sp. 2
Allium cyaneum 2
Exiguobacterium sp. 1
Dinidoridae 4
Uronema nigricans 1
Sillago sihama 1
Numida meleagris 134
Coturnix japonica 12
Excoecaria agallocha 4
Procypris mera 17
Raphanus sativus var. caudatus 2
Bombus cullumanus 1
Bougainvillea 2
Camellia impressinervis 4
Allium chienchuanense 1
Atraphaxis bracteata 1
Bos gaurus 10
Corylus colurna 3
Oryza alta 37
Gymnocypris eckloni 9
Vigna angularis var. angularis 18
Hernandia sonora 4
Rattus rattus 8
Prunus domestica 1
Nymphaea mexicana 1
Diaporthe longicolla 1
Elaeocarpus glabripetalus 1
Crataegus pinnatifida 1
Carpinus betulus 1
Canis lupus dingo 12
ammonia-oxidizing enrichment culture 524
Sphingomonas 3
Capsicum frutescens 10
Chlorocebus sabaeus 1
Mangifera sylvatica 1
Cherax quadricarinatus 6
Polygala 1
Actaea dahurica 1
Moricandia arvensis 1
Zanthoxylum piasezkii 1
Populus simonii x Populus nigra 12
Nitrospira defluvii 12
Adenophora triphylla 1
Uronemita parabinucleata 1
synthetic construct 116
Corylus cornuta var. californica 3
Amynthas corticis 26
Brevundimonas sp. 1
Waltheria indica 4
Thinopyrum elongatum 1
Eupolyphaga sinensis 1
Oceanospirillaceae bacterium 1
Wolfiporia cocos CGMCC 5.0078 1
Cunninghamella echinulata 2
Zea mays subsp. mays 62
Cynodon dactylon x Cynodon transvaalensis 1
Tetrahymena borealis 1
Xanthomonas campestris pv. campestris 2
Corylus chinensis 3
Bombus difficillimus 2
Botryosphaeria qingyuanensis 1
Sphenomorphus incognitus 1
Vibrio alginolyticus 2
Rhizophora mangle 4
Saccharina japonica x Saccharina latissima 1
Thaumarchaeota archaeon 1
Lygaeidae 7
Alydidae 9
Lycoris radiata 12
Cyperus esculentus 8
Bombus sibiricus 2
Ignavibacteria bacterium 1
Chamaecyparis hodginsii 6
Lasiodiplodia theobromae 1
Plataspidae 4
rumen bacterium 16
Xylocarpus granatum 3
Calligonum ebinuricum 1
Potamotrygon leopoldi 1
blank sample 3
Bougainvillea glabra 16
Bruguiera sexangula 4
Diabrotica virgifera virgifera 7
Panthera tigris amoyensis 31
leaf metagenome 12
Fagopyrum tibeticum 1
Populus tremuloides 18
Trichoderma asperellum 1
Carassius cuvieri 14
Schizothorax macropogon 1
Ophiorrhiza pumila 4
Viruses 1
Botryosphaeria dothidea 1
Chloranthus spicatus 1
Fragaria vesca 3
Ajuga decumbens 8
Polygala fallax 1
Trebouxia 1
Musculus 4
Ceriops tagal 4
Nymphaea rubra 1
Anemone flaccida 2
Acer amplum subsp. catalpifolium 1
freshwater sediment metagenome 25
Bactrocera dorsalis 19
Ilex 5
Candidatus Dadabacteria 1
Phyllostachys angusta 1
Gossypium arboreum 2
Lagerstroemia 18
Medicago cancellata 1
Bos grunniens x Bos taurus 10
Larix gmelinii var. olgensis 18
Sorbus rehderiana 1
Camellia angustifolia 1
Populus angustifolia 1
Nanoarchaeota 7
Kocuria sp. 1
Apoidea 10
Thinopyrum obtusiflorum 1
Shinisaurus crocodilurus vietnamensis 10
Idesia polycarpa 1
Pyrus calleryana 1
Anser cygnoides domesticus 35
Aquilaria sinensis 12
Herminiimonas sp. 2
Tetrahymena canadensis 1
Xanthomonas oryzae 15
Corylus heterophylla 2
Bombus skorikovi 1
plastic metagenome 580
Corydoras panda 1
Bacteroidetes 3
Equus asinus asinus 75
Eria lasiopetala 1
Strongylocentrotus intermedius 4
Brevibacillus laterosporus 1
Usnea 1
Corydalis tomentella 1
Salvia bowleyana 1
Bdellovibrionales bacterium 1
Actinomadura 1
Rhinolophus sinicus 1
Tessaratomidae 3
Populus ningshanica 4
Welwitschia mirabilis 1
Epinephelus 6
Amorpha fruticosa 6
Acanthus ebracteatus 4
Candidatus Altiarchaeota 17
Canis sp. 127
Rhizophora stylosa 26
Pinctada fucata 1
Schlumbergera virus X 1
Litchi chinensis 16
Nycticebus pygmaeus 59
Schizothorax waltoni 1
Stenotaphrum secundatum 49
Medicago archiducis-nicolai 1
Human alphaherpesvirus 1 52
Rosa x damascena 9
Zantedeschia hybrid cultivar 1
Clinopodium chinense 1
Nabidae 7
Dianthus superbus 1
Mariniphaga 1
Camellia leptophylla 1
Adiantum capillus-veneris 1
Nicotiana plumbaginifolia 1
Cactus virus X 1
Rhizophora mucronata 35
Reduviidae 14
Ilex vomitoria 1
Eremias argus 1
Chaenomeles japonica 1
Withania coagulans 1
Eleusine coracana 1
Phytophthora vignae 1
Neophocaena asiaeorientalis 48
Camellia kwangsiensis 1
Secale sylvestre 2
Pseudomonas plecoglossicida 2
leaf litter ascomycete strain its003 1
Acidovorax sp. 3
Uronema marinum 1
Phlegmariurus nummulariifolius 1
Tor sinensis 17
Myotis ricketti 1
Saccharomycopsis fibuligera 1
Chaenomeles cathayensis 1
Eremias multiocellata 1
Oxalis corymbosa 1
Paraburkholderia sp. 1
Tetrahymena elliotti 1
Bradyrhizobium 1
Ostrya rehderiana 1
Rhopalidae 4
Bombus waltoni 2
Papaver somniferum subsp. setigerum 8
Yonghaparkia sp. 2
Allium wallichii var. platyphyllum 1
Prochlorococcus marinus 12
Oryza glumipatula 3
Avena wiestii 1
Ilex polyneura 1
Nitrospirae bacterium 5
Strongylocentrotus purpuratus 10
Clostridium sp. 1
Magnolia aromatica 1
Phoenix dactylifera 15
Salvia miltiorrhiza f. alba 1
Ichthyophis bannanicus 2
Nocardiopsis dassonvillei 1
Kalanchoe blossfeldiana 1
Berytidae 5
Cucumis anguria var. anguria 2
Myoporum bontioides 4
Pavo cristatus 1
Mugil cephalus 1
Dolichandrone spathacea 3
Agrimonia pilosa var. nepalensis 1
Phoebe bournei 1
Calohypnum plumiforme 1
Parastrachiidae 1
Carassius gibelio 1
Aristolochia debilis 1
Whitmania pigra 1
Human gammaherpesvirus 4 2232
Panax vietnamensis 375
Prevotella copri 5
Pisum sativum 4
Cardiospermum halicacabum 2
Camellia pyxidiacea var. rubituberculata 1
Camellia tachangensis 1
Isoetes 1
Sredinskya grandis 1
Protopterus dolloi 1
Cupriavidus metallidurans 1
Xanthomonas oryzae pv. oryzae 23
Babesia duncani 1
Pseudopodoces humilis 60
Lerwa lerwa 1
Sonneratia apetala 4
Larimichthys polyactis 5
Capsicum baccatum 5
Secale cereale subsp. vavilovii 1
Corylus jacquemontii 3
Medicago edgeworthii 1
Polygonatum cyrtonema 12
Aquabacterium sp. 1
Rosa rugosa 8
Onychostoma macrolepis 13
Pethia ticto 9
Sulfitobacter sp. 1
Aspergillus flavus 6
Nuphar lutea 1
Chaenomeles sinensis 1
Huperzia serrata f. longipetiolata 1
Stephanodiscus sp. 15
Mus musculus cytomegalovirus 2 1
Tetrahymena malaccensis 1
Methylobacterium sp. 1
Kappaphycus alvarezii 1
Flavobacteriales bacterium 1
Allium nanodes 1
Bemisia tabaci 8
Oryza meridionalis 11
Oreonectes jiarongensis 1
Myxine glutinosa 1
Clostridium tyrobutyricum 9
Magnolia chapensis 12
Tetrahymena empidokyrea 1
Anaerolineales bacterium 1
Hydrophis cyanocinctus 1
Dicerorhinus sumatrensis 2
Nematostella vectensis 8
Colobathristidae 1
Elsinoe arachidis 1
Toona sinensis 1
Crossoptilon auritum 11
Magnolia hypoleuca 1
Brassica rapa subsp. oleifera 4
Elsinoe batatas 1
Eucalyptus urophylla 15
Halenia elliptica 2
Nocardia aobensis 1
Scutelleridae 5
Megacarpaea delavayi 1
Aristolochia fimbriata 1
Camellia crassicolumna 1
Hepatitis B virus 128
Albizia julibrissin 1
Talipariti hamabo 4
human blood metagenome 3
Myzus persicae 3
Eonycteris spelaea 1
Trachidermus fasciatus 1
Actinidia chinensis var. chinensis 36
sludge metagenome 1
Camellia tachangensis var. remotiserrata 1
Pluchea indica 4
Saccharomyces cerevisiae S288C 6
Rhodoferax 1
Medicago platycarpos 1
Metarhizium sp. RCEF2001 1
Plasmid vector pSP189 1
Miridae 17
Sonneratia caseolaris 4
Streptomyces fungicidicus 8
Camellia parvisepala 1
Papaver rhoeas 8
Corylus sieboldiana 3
Medicago minima 1
Polygala tenuifolia 1
Laodelphax striatellus 14
Arcicella sp. 1
Bombus turneri 3
Rattus tanezumi 73
Musa acuminata 15
Onychostoma gerlachi 13
Crataegus pinnatifida var. major 1
Penicillium griseofulvum 1
Unknown 48
uncultured bacterium 7
Penicillium digitatum 12
Mangifera persiciforma 1
Carassius auratus x Cyprinus carpio 12
Kiloniella sp. 2
Ostryopsis intermedia 32
Tetrahymena paravorax 1
Raddia distichophylla 1
Bombus pyrosoma 3
Sulfurimonas sp. 2
Oxalobacteraceae bacterium IMCC9480 1
Gammaproteobacteria 3
Capsicum annuum var. annuum 1
Suaeda australis 4
Pinus densiflora var. ussuriensis 1
Candidatus Hydrogenedentes bacterium 1
Protopterus annectens 111
Linaria 12
Hibiscus cannabinus 1
Acidimicrobiia bacterium 5
Halomonas 1
Tadorna ferruginea 3
Malcidae 10
Allium atrosanguineum 1
Mesoflavibacter 4
Mactra antiquata 2
Crossoptilon mantchuricum 41
Equus kiang 6
Antirrhinum hispanicum 8
Carassius auratus auratus 1
Babesia sp. Xinjiang 6
unclassified Oreonectes 4
Glebionis coronaria 1
Dendrocalamus latiflorus 12
bacterial mixed DNA library 19
Scirpus x mariqueter 4
African swine fever virus 1
Malus angustifolia 1
Polyozellus multiplex 1
Allium sikkimense 1
Bat coronavirus 1
Baylisascaris schroederi 6
Taxodium 4
Styphnolobium japonicum 24
Capsicum chacoense 2
Scleromitrula shiraiana 7
Incarvillea sinensis 1
Chilo suppressalis 7
Populus mexicana 3
Lycium chinense 1
Rhinopithecus roxellana 1
Pyrus ussuriensis 2
Metarhizium rileyi 4
Alphaproteobacteria 6
Siniperca chuatsi 1
Actinidia polygama 1
human eye metagenome 95
Bombus terrestris 9
Sonneratia ovata 4
Mesorhizobium 1
Premna serratifolia 4
Camellia tetracocca 1
Metazoa 5
Rosa hybrid cultivar 9
Medicago monantha 1
Corynebacterium glutamicum ATCC 13032 2
Arcobacter sp. 1
Enterococcus sp. 1
Allium 32
Paramecium bursaria 1
Garra pingi 10
Pseudeurotium bakeri 11
Moniezia sichuanensis 2
Morchella conica 1
Burkholderia sp. 6
Phalaenopsis lobbii 1
Populus heterophylla 2
Nocardia amikacinitolerans 1
Tetrahymena pyriformis 1
Acinetobacter sp. 5
Phyllostachys edulis 9
Micavibrio sp. 1
rhizosphere metagenome 20
Firmicutes 31
Stenotrophomonas 44
[Clostridium] symbiosum ATCC 14940 1
Shiraia bambusicola 1
Pinus densiflora var. densiflora 1
Candidatus Kaiserbacteria bacterium 1
Erysipelothrix rhusiopathiae 2
Scyphiphora hydrophyllacea 4
Elaphurus davidianus 1
Ovis ammon polii 1
Candidatus Dadabacteria bacterium 2
Anser anser 3
Eukaryota 51
Ipomoea pes-caprae 4
Stenocephalidae 1
Jaagichlorella hainangensis 1
Periploca forrestii 1
Calycanthus chinensis 12
Gelidibacter 1
Scincella reevesii 1
Tachysurus fulvidraco 1
Capsicum rhomboideum 1
Bat coronavirus 512 30
Felis silvestris 1
Thespesia populnea 4
Ovis orientalis 1
Brassica juncea 18
Phrynocephalus axillaris 1
Myoviridae 3
Pistacia vera 121
Fusarium meridionale 1
Allium spirale 1
Bat SARS-like coronavirus 91
Barringtonia racemosa 3
Triticum spelta 2
Hemibarbus maculatus 2
Eisenia andrei 1
tick metagenome 1
Sogatella furcifera 10
Cucumis dipsaceus 1
Chlamydomonas sp. ICE-L 10
Silurus meridionalis 11
glacier metagenome 12
Pogostemon cablin 9
Nymphaea 5
Agrocybe cylindracea 13
Camellia sasanqua 1
Sulfuriferula 1
Moschus berezovskii 39
Bactria 52
Gypaetus barbatus 1
Sorghum 1
Phytophthora colocasiae 1
Medicago orthoceras 1
Hydrophis curtus 1
Polygala japonica 1
Rickettsia sibirica 1
Allium cepa 1
Scatophagus argus 1
Planiliza haematocheilus 1
Hoya carnosa 4
Rhodobacteraceae bacterium 2
Caulobacter sp. 1
Pyrrhocoridae 5
Phalaenopsis wilsonii 2
uncultured deep-sea bacterium 1
Citrobacter freundii 1
Avena strigosa 1
Suaeda glauca 4
Bombus confusus 2
Bombus opulentus 2
Phyllostachys nidularia f. farcta 1
Syntrophococcus 1
Stenotrophomonas maltophilia 10
Cucumis melo subsp. melo 667
Pyrus x bretschneideri 12
Kordiimonadales bacterium 1
Actinomycetia 10
Bombus polaris 1
amphibian metagenome 5
Phaeodactylum tricornutum 12
Taraxacum mongolicum 25
Portulaca oleracea 1
Tingidae 5
Vigna unguiculata subsp. sesquipedalis 12
Nitrospinaceae bacterium 1
Pteropus alecto 3
Coffea canephora 15
Ficus hispida 2
Bat MERS-like coronavirus 43
Lumnitzera littorea 4
Scincella modesta 1
Populus wulianensis 4
Klebsormidium nitens 1
Polaromonas 1
Gentiana leucomelaena 1
Veronicastrum axillare 1
Microvirus 1
Raphanus sativus var. raphanistroides 2
Capsicum cardenasii 1
Euphorbia hylonoma 1
Sida acuta 3
Paracanthobrama guichenoti 10
Thalassospira 2
Ipomoea purpurea 12
Capsicum pubescens 1
Bombus picipes 2
Carpinus fangiana 12
Victoria cruziana 1
Ilyonectria destructans 2
Dioscorea zingiberensis 3
Pternopetalum nudicaule 1
Dalbergia tonkinensis 3
Aegialitis annulata 3
Enterobacteriaceae bacterium 6
Microbacterium 1
Eupristina verticillata 1
Rosa chinensis var. spontanea 13
Sorbus pohuashanensis 1
Megalobrama amblycephala 1
Sesbania cannabina 3
sheep gut metagenome 200
Pleurotus eryngii 18
Planctomycetales 4
Pinus densiflora 1
Phyllostachys heteroclada 1
Henriciella sp. 1
Tetrahymena vorax 1
Carassius carassius 1
Chloroflexi bacterium 1
Staphylococcus epidermidis 1
Lobularia maritima 1
Thiotrichaceae bacterium 1
Mycobacterium tuberculosis variant bovis 2
Umbilicaria americana 1
Morinda citrifolia 3
Saccharomyces uvarum 1
Ochotona curzoniae 1
Spinacia tetrandra 1
Dunaliella salina 2
Plokiophilidae 2
Oropetium thomaeum 1
Bat alphacoronavirus 30
Artibeus jamaicensis 7
Trema tomentosum 3
Avena hirtula 1
Bat coronavirus HKU10 6
Raphanus sativus var. oleiformis 2
Proboscidea 45
Lumnitzera racemosa 4
fermentation metagenome 18
Pyrus pashia 1
Trigonella cachemiriana 1
Allium cyathophorum 27
Ilex micrococca 1
Pseudocohnilembus persalinus 1
Viola kunawarensis 1
Saccharomyces cerevisiae virus L-A 1
Canavalia rosea 4
Capsicum eximium 1
Ricinus communis 7
Fusarium solani 10
soil bacterium 3V-01 1
Cucumis zeyherii 1
Carpinus japonica 2
Pachygronthidae 3
Aspergillus cristatus 1
Euryarchaeota 1
Brasenia schreberi 1
Phytophthora melonis 1
Fragaria nilgerrensis 1
Cyprinus carpio carpio 1
Cuon alpinus 1
Bonia amplexicaulis 1
Timandra comae 45
respiratory tract metagenome 1
Mycobacterium tuberculosis variant africanum 1
Melastoma dodecandrum 1
Eucalyptus grandis 201
Delftia sp. 2
Rhinolophus bat coronavirus HKU2 104
Bombus haemorrhoidalis 3
Sphingopyxis sp. 2
Artemisia absinthium var. calcigena 1
Lentinula edodes 2
Alteromonas 1
Microhyla fissipes 51
Escherichia virus M13 2
Actiniaria 3
Escherichia 4
Aralia elata 16
Agastache rugosa 7
Avena brevis 1
Cucumis africanus 1
Chromatiales bacterium 1
Arundo formosana 1
Drosophila erecta 2
Staphylococcus haemolyticus 1
Phlegmariurus phlegmaria 1
unclassified Rhizobium/Agrobacterium group 1
Eurytemora 123
Takifugu bimaculatus 1
uncultured Pseudopedinella 9
Cairina moschata 1
Fasciola gigantica 1
Ustilaginoidea virens 1
Koreocerus koreanus 1
Ehrharta erecta 1
Nymphaea caerulea 1
Canis lupus pallipes 3
Avena eriantha 1
Cyprinus carpio 'Songpu mirror carp' 31
Ficus adhatodifolia 2
human feces metagenome 40
Ciona savignyi 11
Polygonatum sibiricum 3
Epimedium pubescens 1
Eoscarta assimilis 1
Allium hookeri 2
Pentatomidae 36
mouse metagenome 9
Malus florentina 1
Fraxinus chinensis 3
Capsicum galapagoense 1
wastewater metagenome 4
Coffea arabica 15
Euphorbia esula 1
Fusarium oxysporum species complex 1
soil bacterium 4V-01 10
Astragalus adsurgens 2
Sphingobium hydrophobicum 4
Allium cepa var. aggregatum 2
Taxus mairei 75
Schizothorax kozlovi 1
Apis laboriosa 1
Candidatus Woesearchaeota 3
Oryza australiensis 6
Stropharia rugosoannulata 1
Schizostachyum dumetorum var. xinwuense 1
Siraitia grosvenorii 7
Aronia melanocarpa 1
Diphasiastrum complanatum 1
Bombus consobrinus 2
Angelica biserrata 1
Aythya nyroca 1
Miniopterus bat coronavirus HKU8 18
Nypa fruticans 3
Salix chaenomeloides 1
Nocardia puris 2
Rhizobiales bacterium 3
Allium fasciculatum 1
Candida albicans 16
Flavobacterium 1
Trigonella foenum-graecum 7
Nocardia carnea 4
Cladopsammia gracilis 4
Acidobacteria bacterium 10
Portulaca pilosa 4
Prunella vulgaris 8
Cucumis melo subsp. agrestis 508
Deltaproteobacteria bacterium 8
Acidipila 1
Streptococcus 12
Aconitum carmichaelii 6
Capitulum mitella 1
Ferdinandea cuprea 1
Ficus gasparriniana 2
Ilex intermedia 1
Hypophthalmichthys nobilis 1
Mycobacterium tuberculosis variant microti 1
Carpinus cordata 55
Nocardia veterana 1
Melilotus dentatus 1
hot springs metagenome 26
candidate division KSB1 bacterium 3
Tadorna 166
Pseudochlorella pringsheimii 2
Carpinus tschonoskii 1
Rhododendron henanense 1
Cupriavidus oxalaticus 6
Parauronema virginianum 1
Avena ventricosa 1
Botryosphaeria fabicerciana 1
Ficus aurea 2
Pangolin coronavirus 1
Xanthoceras sorbifolium 329
seed metagenome 42
Crambe hispanica subsp. abyssinica 1
Allium mairei 3
Pseudoalteromonas 1
Rosa odorata 12
Cymbidium mastersii 1
Malus fusca 1
Fraxinus pennsylvanica 3
Actinidia kolomikta 19
Empoasca onukii 66
Corylus avellana 3
Limonium sinense 4
Phrynocephalus forsythii 1
Luciobarbus brachycephalus 6
Gentiana 1
Sedum lineare 3
Ostrya carpinifolia 1
human saliva metagenome 40
Averrhoa carambola 1
Botryosphaeria corticis 1
Mitsuaria chitosanitabida 1
Bombus soroeensis 2
Candidatus Micrarchaeota 13
Stachytarpheta jamaicensis 3
Silurus asotus 1
Oryza latifolia 18
Laguncularia racemosa 4
Achnatherum splendens 1
Lithospermum erythrorhizon 1
Bombus ignitus 3
Pinus pumila 3
Nanoarchaeales 1
Betacoronavirus 1
Pandanus tectorius 2
Cynodon transvaalensis 22
Ipomoea trifida 1
Nocardia inohanensis 1
Sphingobium sp. 1
Allium maowenense 1
Candida parapsilosis 1
Flavobacterium sp. 2
Bubalus bubalis bubalis 1
Sphingomonadales bacterium 3
Meloidogyne incognita 2
Klebsiella oxytoca 1
Lasiopodomys mandarinus 1
Tegillarca granosa 2
Gemmatimonadetes bacterium 5
Ilex suaveolens 1
Drosophila sechellia 2
Streptococcus pneumoniae 2
Avicennia germinans 4
Staphylea bumalda 1
Carpinus langaoensis 1
Ictalurus punctatus 1
Nocardia 1
Paralembus digitiformis 1
Conocarpus erectus 4
Ilyonectria robusta 1
Salix brachista 1
Columba 27
Chlorella vulgaris 1
Rhyparochromidae 14
Trigonella emodi 1
Ficus carica 2
Nymphaea gigantea 2
Clerodendrum philippinum 1
Ficus cyrtophylla 2
aquaculture metagenome 27
Cucurbita moschata 3
Ophiopogon japonicus 3
Microbacterium sp. 2
Pistacia atlantica subsp. mutica 13
Raphanus sativus 18
Allium wallichii 2
Rhizomys pruinosus 6
Morus alba var. atropurpurea 3
coral metagenome 5
Echovirus E11 20
Malus ioensis 1
Pongamia pinnata 4
Capsicum baccatum var. baccatum 1
Corylus cornuta 3
Daucus carota 3
Hippocampus abdominalis 1
Ovis vignei 1
Phrynocephalus frontalis 1
Puntigrus tetrazona 10
Antirrhinum 39
Iris tectorum 1
Chloris virgata 1
Ostrya japonica 1
liver metagenome 1
Thermophis zhaoermii 6
Cunninghamia lanceolata 1
Camellia japonica 15
Acanthus ilicifolius 4
unclassified Acidobacteriales 1
Artemisia lavandulifolia 1
Human papillomavirus type 6 1
Oryza officinalis 10
Pemphis acidula 4
Geocoridae 6
Stipa capillacea 6
uncultured marine group I thaumarchaeote 5
Nanopusillaceae 4
Tylonycteris bat coronavirus HKU4 40
Cynodon x magennisii 1
Paeonia lactiflora 18
Alphaproteobacteria bacterium 4
Allium prattii 5
Fusarium 1
Myospalax aspalax 5
Allium chrysocephalum 1
Bursaphelenchus xylophilus 1
Cucumis myriocarpus 2
Pseudogyrinocheilus prochilus 9
Sesuvium portulacastrum 4
Nitrosomonadaceae bacterium 2
Enterococcus faecalis 52
Scylla paramamosain 11
Aspergillus glaucus 1
Kocuria indica 1
Carpinus mollicoma 1
Esox lucius 121
Nocardia sp. 13
Nitraria 15
Cryptomonas curvata 3
Nocardia africana 1
Camellia fangchengensis 1
Nymphaea prolifera 1
Juglans mandshurica 1
Heterogastridae 5
Bougainvillea peruviana 1
triploid Cyprinus carpio x (Carassius auratus red var. x Cyprinus carpio) 6
Paris polyphylla 22
Chloranthus sessilifolius 1
Phlegmariurus goebelii 1
Ficus sagittata 2
Luffa aegyptiaca 1
Elaeis guineensis 27
Scaevola hainanensis 4
Fragaria x ananassa 12
Allium spicatum 4
Pantoea 3
fish metagenome 1
Cucumber green mottle mosaic virus 1
Leucaena leucocephala 2
Capsicum annuum var. glabriusculum 1
Colon 12
Holcoglossum omeiense 1
Crepis capillaris 1
milk metagenome 26
Aromatoleum 1
Mangifera 1
Buteo hemilasius 1
Lateolabrax maculatus 100
Ostrya knowltonii 1
Ilex dabieshanensis 1
Dracaena cambodiana 1
Aegilops longissima 2
Oryza barthii 6
Zanthoxylum bungeanum 7
Ilex purpurea 1
Candidatus Altiarchaeum 1
Wohlfahrtia magnifica 16
Nymphaea tetragona 1
Stenotrophomonas sp. 1
Ficus esquiroliana 2
Sthenoteuthis 1
Acanthopagrus schlegelii 27
Ostrya trichocarpa 1
Pipistrellus bat coronavirus HKU5 13
Phytophthora capsici 1
Anas zonorhyncha 7
Largidae 6
Gammaproteobacteria bacterium 17
Allium rude 2
Fusarium graminearum 98
Pseudomonas fluorescens 1
Nocardia transvalensis 1
Bat coronavirus HKU6 53
Musa acuminata AAA Group 18
Alphaendornavirus 17
Mizuhopecten yessoensis 8
Proteus mirabilis 1
Adenophora stricta 1
Psammosilene tunicoides 9
Sinilabeo laticeps 8
Candidatus Parcubacteria 1
Rhodobiaceae bacterium 1
Bacillus 1
Phacochoerus africanus 10
Cardamine circaeoides 1
Crataegus maximowiczii 2
Bat coronavirus 1 102
Poecilia reticulata 8
Nocardia vaccinii 1
Aradidae 3
Peristrophe japonica 1
Pistacia integerrima 4
Mutinus fleischeri 1
Falco peregrinus 35
Lycopodium 1
Raphanus sativus var. sativus 2
Morchella importuna 2
Pan troglodytes 4
Casuarina equisetifolia 4
Sphenomorphus indicus 1
Phlegmariurus salvinioides 1
Ficus vasculosa 2
Schizopygopsis selincuoensis 7
Trichosanthes kirilowii 8
Ficus maxima 2
Bromus catharticus 1
Secale cereale subsp. segetale 2
Nocardia blacklockiae 2
Trachypithecus francoisi 1
Cistanche deserticola 6
Allium ascalonicum 12
Human immunodeficiency virus 8
Colwellia sp. 1
vaginal metagenome 25
Raphanus raphanistrum 2
Sulfitobacter 1
Phrynocephalus theobaldi 1
Lycium 305
Lathyrophthalmus 2
Pinus sibirica 3
Viola philippica 1
Oryza sativa temperate japonica subgroup 132
Ursus maritimus 1
Aegilops markgrafii 1
Echinochloa esculenta 1
Raphanus raphanistrum subsp. landra 2
Ilex viridis 1
Oryza punctata 1
Falco cherrug 26
Morus macroura 2
Bombus superbus 2
Ficus oligodon 2
Senna tora 1
Citrobacter sp. 1
Severe acute respiratory syndrome-related coronavirus 8
Schizosaccharomyces pombe 1
Cercopithecus mona 1
Ficus cyathistipula 2
Oceanospirillales bacterium 1
Diaporthe batatas 1
Trichoderma harzianum 2
Tupaia belangeri 1
Capsicum minutiflorum 2
Aconitum scaposum 1
Betaendornavirus 3
Artemia parthenogenetica 2
Salmonella 1
Verasper variegatus 17
Altica viridicyanea 4
Paris polyphylla var. chinensis 1
Bacillus licheniformis 19
Thinopyrum intermedium 1
Atractylodes lancea 1
Equus caballus x asinus 19
Enterococcus thailandicus 1
Acremonium sp. 2
Oreochromis mossambicus 19
Pinus koraiensis 3
Cydnidae 4
Curcuma kwangsiensis 9
Populus koreana 3
Pistacia khinjuk 13
Crataegus bretschneideri 1
Acryllium vulturinum 5
Corchorus olitorius 1
Cerbera manghas 4
Malus x robusta 1
Paeonia ostii 7
Volkameria inermis 4
Fusarium commune 1
Ranunculus sceleratus 1
Saccharomyces cerevisiae BY4743 1
Ficus microdictya 2
Triticum monococcum subsp. aegilopoides 8
Sitodiplosis mosellana 1
Lilium hybrid cultivar 9
Rattus leucopus 1
Malus sylvestris 10
unclassified sequences 2
Medicago 1
Allium cyathophorum var. farreri 12
Castanopsis hystrix 12
Populus davidiana x Populus alba var. pyramidalis 1
Megadenia pygmaea 1
Raphanus raphanistrum subsp. raphanistrum 2
Nitrosopumilus maritimus SCM1 3
Ebola virus 1
Fasciola hepatica 1
Haliotis midae 1
Cuscuta campestris 1