Single-Cell Transcriptomics of the Human Endocrine Pancreas



 B

asic Information

Project ID:
GSE83139
Species:
Homo sapiens
Year:
2016
Technology:
Smart-seq2
Title:
Single-Cell Transcriptomics of the Human Endocrine Pancreas
Tissue:
Pancreas
Cell:
/
Other Information:
type 2 diabetic
Summary:

We successfully sequenced and annotated more than 400 cells from child, adult control, type 1 diabetes and type 2 diabetes donors. We detect donor-type specific transcript variation. We also report that cells from child donors have less defined gene signature. Cells from type 2 diabetes donors resemble juvenile cells in gene expression.

Design:

Cells from three adult controls (56, 74, 92), one donor with type 1 diabetes (91), two donors with type 2 diabetes (75, 143), and two child donors (40, 72) were sequenced. Numbers in parathesis indicates number of cells sequenced.

Description:

Single cell RNA-seq of human pancreatic endocrine cells from Juvenile, adult control and type 2 diabetic donors.


D

i

mension reduction and Clustering

Tsne (colored by disease type)
Umap (colored by disease type)

Ci

r

cRNA

The number of cells
The number of circRNA