gene number TP53 19 KMT2D 10 ARID1A 7 KDM6A 7 CREBBP 5 CUL3 5 ERBB2 4 KMT2A 4 WHSC1L1 4 ATRX 3 BAP1 3 NOTCH3 3 NRAS 3 PIK3CA 3 POLE 3 RBM10 3 ALK 2 ATM 2 AXL 2 BCOR 2 BRCA2 2 CDH1 2 CDKN1A 2 CXCR4 2 DDR2 2 EP300 2 ERBB3 2 FAT1 2 FOXP1 2 JAK1 2 KDM5A 2 KDM5C 2 KMT2C 2 MLH1 2 MYC 2 PDGFRA 2 PREX2 2 SAMD9L 2 SETD2 2 STAG2 2 TSHR 2 ABCC9 1 AFF1 1 AKT1 1 AKT3 1 ALOX12B 1 AMER1 1 APC 1 AR 1 ARAF 1 ARID1B 1 ASXL1 1 BLM 1 BRAF 1 BRCA1 1 BTF3 1 BTK 1 CASP8 1 CCND1 1 CDK6 1 CDK8 1 CDKN1B 1 CDKN2A 1 CHEK2 1 CSF1R 1 CTCF 1 CTNNB1 1 CYLD 1 DIS3 1 DNMT3A 1 EPHA5 1 EPHB1 1 ERG 1 FBXW7 1 FGF3 1 FGFR2 1 FGFR3 1 FLT1 1 FLT3 1 GLI1 1 GNA11 1 GNAS 1 GRIN2A 1 HGF 1 IL7R 1 INPP4B 1 IRS2 1 KEAP1 1 KRT8 1 MDM4 1 MITF 1 MSH6 1 MUTYH 1 NBN 1 NEDD4L 1 NF1 1 NFE2L2 1 NFKBIA 1 NKX2-1 1 NSD1 1 NTRK2 1 PARK2 1 PAX5 1 PIK3CB 1 PPP2R1A 1 PRDM1 1 RAC1 1 RAD21 1 RAD50 1 RAD51D 1 RB1 1 RNF43 1 SF3B1 1 SIGLEC7 1 SMAD2 1 SMAD4 1 SMARCA4 1 SMARCB1 1 SOX2 1 SPTA1 1 STK11 1 TACC1 1 TBX3 1 TNFAIP3 1 TOP1 1 TOP2A 1 TYMS 1 UGT1A1 1 ZNF521 1