gene number APC 197 TP53 156 SMAD4 58 SOX9 32 ATM 27 PIK3CA 25 AMER1 21 FBXW7 21 KMT2D 18 KRAS 18 BRCA2 15 CTNNB1 15 RNF43 15 ARID1A 14 BRAF 13 EGFR 13 EPHB1 13 ARID2 12 BRCA1 12 EPHA3 12 FLT4 12 KMT2C 12 SMAD2 12 ALK 11 CARD11 11 FAT1 11 EPHA5 10 EPHA7 10 ERBB4 10 GNAS 10 MED12 10 NOTCH1 10 NRAS 10 PTEN 10 SMAD3 10 AR 9 ATR 9 CASP8 9 DOT1L 9 PIK3CG 9 PIK3R1 9 ASXL1 8 ERBB3 8 IRS2 8 KMT2A 8 MTOR 8 NTRK3 8 PREX2 8 TSC2 8 ATRX 7 CREBBP 7 ETV6 7 FLT1 7 MAP2K4 7 NF1 7 NTRK1 7 PDGFRA 7 PIK3C2G 7 RBM10 7 SMARCA4 7 SPEN 7 TGFBR2 7 CSMD3 6 DDR2 6 ESR1 6 FGFR1 6 INHBA 6 MSH2 6 NOTCH3 6 PDCD1 6 ROS1 6 ACVR2A 5 AKT1 5 ARID1B 5 CDH1 5 CDKN1B 5 CXCR4 5 DPYD 5 EP300 5 ERBB2 5 FLT3 5 KDM5C 5 KDR 5 KIT 5 MET 5 MLH1 5 PBRM1 5 POLE 5 SETD2 5 ABCB1 4 AXIN1 4 CIC 4 COL11A1 4 ESRP1 4 FUBP1 4 GLI1 4 GRIN2A 4 HGF 4 IL7R 4 JAK3 4 KDM6A 4 MAP3K1 4 NTRK2 4 NUP93 4 PAX5 4 PIK3CB 4 RAD51C 4 RUNX1T1 4 SLC34A2 4 SOCS1 4 SYK 4 TERT 4 TET2 4 WHSC1 4 WT1 4 ACVR1B 3 AURKB 3 AXL 3 B2M 3 BCOR 3 BRIP1 3 CANT1 3 CCNE1 3 CD79A 3 CDC73 3 CDK12 3 CDK8 3 CDKN2A 3 COL4A1 3 CSF1R 3 DICER1 3 ERCC4 3 FAM131B 3 FANCA 3 FAT3 3 FGFR2 3 FGFR4 3 GATA3 3 HNF1A 3 IGF1R 3 KMT2B 3 L2HGDH 3 LRP1B 3 MAP2K2 3 MITF 3 MPL 3 MRE11A 3 MSH6 3 NKX2-1 3 NSD1 3 NT5C2 3 PARK2 3 PLA2G7 3 PLCG2 3 PMS2 3 PPP2R1A 3 PTCH1 3 RHOA 3 RYR2 3 SF3B1 3 SLIT1 3 SMO 3 TBC1D8B 3 TSC1 3 ZFHX4 3 ABL1 2 AKT2 2 ARNT 2 BAZ2B 2 BCR 2 BLM 2 BRINP3 2 BTG2 2 BTK 2 CA2 2 CADM1 2 CDH19 2 CDK6 2 CDKN1A 2 CEBPA 2 CREB1 2 CSF3R 2 CTNND1 2 CYLD 2 CYP2C19 2 DNMT3A 2 DOCK2 2 DST 2 DVL1 2 EPHA2 2 EPHA4 2 ETV1 2 EXT2 2 FANCG 2 FAT2 2 FGF14 2 FGF19 2 FGF3 2 FGFR3 2 FOXP1 2 FZD1 2 GATA2 2 GNA11 2 GRIK1 2 GSK3B 2 IRF4 2 JAK1 2 KDM5A 2 KEAP1 2 LYN 2 MAP2K1 2 MAP2K7 2 MEN1 2 MKI67 2 MSH3 2 MYC 2 MYD88 2 NALCN 2 NFASC 2 NFATC2 2 NFKBIA 2 NOTCH2 2 NRG1 2 PDP1 2 PEG3 2 PFKFB1 2 PFKL 2 PIGF 2 PLAU 2 POLD1 2 PPIP5K2 2 PRDM1 2 RAD50 2 RAD52 2 RAD54L 2 RASAL1 2 RB1 2 RICTOR 2 RIPK2 2 RPTOR 2 RUNX1 2 SAMD9L 2 SLC16A3 2 SMARCA1 2 SMARCB1 2 STAG2 2 STK11 2 STRN 2 SUFU 2 TBX3 2 TGFBR1 2 TNFAIP3 2 TTK 2 WHSC1L1 2 XPO1 2 ZNRF3 2 ABCG2 1 ABL2 1 ACO1 1 ACO2 1 ACPP 1 ACTR8 1 ACVR2B 1 ADAM29 1 ADGRA2 1 AFF1 1 AIP 1 AKAP9 1 AKR1C2 1 AKT3 1 ALB 1 ALOX12B 1 AMPH 1 APAF1 1 ARAF 1 AURKA 1 BAIAP2L1 1 BAP1 1 BARX1 1 BCAT1 1 BCL2L1 1 BCORL1 1 BMPR1A 1 BRD4 1 BRD9 1 BRINP1 1 BRWD1 1 BTG1 1 BTN3A1 1 BUB1B 1 CA9 1 CACNA2D4 1 CAMK2A 1 CBL 1 CBLB 1 CCNA1 1 CCNA2 1 CCNB1 1 CCND3 1 CD274 1 CD28 1 CD40 1 CD40LG 1 CD74 1 CD79B 1 CDH8 1 CDKN2C 1 CHD4 1 CHEK1 1 CHEK2 1 CLEC1B 1 CLK3 1 CLTC 1 CPB2 1 CRABP2 1 CSF2RB 1 CSNK1A1 1 CTNNA1 1 CTSD 1 CUL3 1 CXCL8 1 CYP2A13 1 CYP3A4 1 CYP3A5 1 D2HGDH 1 DCTN1 1 DIDO1 1 DIS3 1 DMD 1 DROSHA 1 DSE 1 EML4 1 EPHX1 1 EPRS 1 EPS15 1 ERC1 1 ERCC1 1 ERCC6 1 ERG 1 ERP44 1 ETV4 1 EXT1 1 EZH2 1 FAM135B 1 FAM46C 1 FANCC 1 FCN1 1 FCN2 1 FCRL1 1 FDPS 1 FGF4 1 FLCN 1 FLI1 1 FOXA1 1 FOXL2 1 GAPDH 1 GATA1 1 GCK 1 GDF7 1 GGCT 1 GLI3 1 GNA13 1 GPC1 1 GRM3 1 GRM8 1 GXYLT1 1 HADH 1 HERPUD1 1 HIC1 1 HIP1 1 HK1 1 HK2 1 HK3 1 HLA-G 1 HN1 1 HNF1B 1 HNRNPA2B1 1 HOOK3 1 HOXB13 1 HSPA8 1 IDH1 1 IDH2 1 IDH3G 1 IL20RA 1 IL6ST 1 IRS1 1 ITCH 1 ITGAX 1 JUN 1 KEL 1 KHDRBS2 1 KLHL12 1 KLLN 1 KSR2 1 LAMP3 1 LIFR 1 LIG4 1 LRIG3 1 LRP2 1 LY86 1 MALT1 1 MAP1B 1 MAP3K7 1 MAX 1 MED12L 1 MED23 1 MITD1 1 MLLT4 1 MSN 1 MUTYH 1 MYCL 1 MYCN 1 MYH9 1 MYO10 1 NBN 1 NCAM2 1 NCOR1 1 NEDD4L 1 NEK8 1 NFE2L2 1 NLGN4X 1 NPM1 1 NR3C1 1 NR4A3 1 NT5C1A 1 PAK2 1 PAK3 1 PALB2 1 PC 1 PCLO 1 PCNA 1 PDCD1LG2 1 PDE10A 1 PDE4B 1 PDGFA 1 PDGFRB 1 PDK1 1 PDK3 1 PDP2 1 PFKFB2 1 PGR 1 PHF8 1 PHKG2 1 PIK3C3 1 PIK3R2 1 PLK1 1 PLXNC1 1 PNMT 1 POFUT2 1 PPARD 1 PPM1D 1 PPP2CA 1 PPP2R1B 1 PRKAR1A 1 PRKCB 1 PRKCI 1 PROKR2 1 PRSS1 1 PTPN1 1 PTPN11 1 PTPRD 1 PTPRG 1 PTPRK 1 PTPRT 1 QKI 1 RAD21 1 RAD51 1 RAD51B 1 RAD51D 1 RALA 1 RAMP3 1 RAN 1 RARA 1 RARB 1 RET 1 RNF146 1 RUNX3 1 SBDS 1 SCN10A 1 SDC4 1 SDHAF2 1 SDHB 1 SEPT9 1 SERPINA7 1 SFRP1 1 SH2D1A 1 SIGLEC7 1 SLC22A16 1 SLC22A4 1 SLC45A3 1 SLCO1B1 1 SLCO1B3 1 SNRNP200 1 SOS2 1 SOX1 1 SOX2 1 SPOP 1 SPRY2 1 SRCAP 1 SRGAP3 1 SRSF2 1 STAT4 1 STAT6 1 SYNE1 1 SYNE2 1 TACC3 1 TCF7L2 1 TCN1 1 TEK 1 TEKT4 1 TFG 1 TGFBR3 1 TGM2 1 THRA 1 TKT 1 TLR2 1 TM6SF1 1 TNFRSF11A 1 TNFSF14 1 TOP1 1 TOP2B 1 TP73 1 TRA2A 1 TRPS1 1 TRPV4 1 TSPAN31 1 UBA1 1 UBE2D1 1 UBE3C 1 UMPS 1 USP25 1 VWF 1 WNT1 1 WNT11 1 WNT4 1 WWP1 1 XPC 1 XRCC1 1 YAP1 1 ZADH2 1 ZNF276 1 ZNF331 1 ZNF444 1 ZNF521 1 ZRSR2 1