gene number TP53 149 ARID1A 29 RB1 25 CTNNB1 24 APC 23 KEAP1 20 KMT2D 17 TSC2 17 AXIN1 15 ALK 14 NFE2L2 14 BRCA2 10 FAT1 10 ROS1 10 CDKN2A 9 EP300 9 ERBB4 9 PREX2 9 SMARCA4 9 ARID2 8 EGFR 8 EPHA5 8 HGF 8 KMT2C 8 MSH6 8 NF1 8 NOTCH3 8 PBRM1 8 PIK3CA 8 POLE 8 SMAD4 8 STK11 8 ARID1B 7 ATR 7 BAP1 7 CDKN1B 7 FGFR2 7 GRIN2A 7 JAK1 7 JAK2 7 NOTCH1 7 NTRK1 7 PLCG2 7 STAT3 7 SYK 7 ATM 6 CIC 6 CREBBP 6 DNMT3A 6 EPHA3 6 ERBB3 6 FLT1 6 IDH1 6 KMT2A 6 SETD2 6 SPEN 6 TSC1 6 AMER1 5 ATRX 5 CARD11 5 EPHA7 5 ERG 5 FBXW7 5 IL7R 5 INPP4B 5 JAK3 5 KDM6A 5 KDR 5 KRAS 5 MAP2K1 5 NOTCH2 5 NTRK3 5 PDGFRA 5 PIK3CG 5 RET 5 TGFBR2 5 ALB 4 ASXL1 4 BRCA1 4 BRIP1 4 CDK12 4 ETV6 4 FAS 4 HNF1A 4 IGF1R 4 KIT 4 LYN 4 MAP2K4 4 NTRK2 4 PRDM1 4 RAD51D 4 SOX9 4 TET2 4 TNFRSF14 4 VEGFA 4 ABL1 3 AXL 3 BCL2 3 BCOR 3 CCNE1 3 CSF1R 3 CSF3R 3 CSNK1A1 3 DICER1 3 DOT1L 3 ERBB2 3 ESR1 3 FAM46C 3 FGFR1 3 FGFR4 3 KDM5C 3 MDM4 3 MED12 3 MEN1 3 MLH1 3 MTOR 3 MYCN 3 NAGA 3 NBN 3 NKX2-1 3 NRAS 3 NSD1 3 PALB2 3 PIK3C2G 3 PIK3R1 3 POLD1 3 PTCH1 3 PTEN 3 RAD54L 3 RICTOR 3 RPS6KA3 3 RPTOR 3 SLC34A2 3 SPOP 3 TERT 3 TNFAIP3 3 ABCB1 2 ABCB11 2 ABCG2 2 ACVR2A 2 APOB 2 AR 2 ARAF 2 AREG 2 ARHGEF7 2 BCL2L1 2 BRAF 2 BRD4 2 CALR 2 CCNA1 2 CCND1 2 CDK8 2 CHEK1 2 CPA1 2 CTCF 2 CXCR4 2 CYLD 2 EPHA2 2 EPHB1 2 EZH2 2 FANCA 2 FGF10 2 FGF19 2 FGF3 2 FGFR3 2 FLT4 2 FOXP1 2 G6PC 2 GATA2 2 GATA3 2 GLI1 2 GNAS 2 INHBA 2 IRS2 2 KDM5A 2 MAP3K1 2 MAX 2 MDM2 2 MRE11A 2 MSH3 2 MYC 2 NALCN 2 NRG1 2 NUTM1 2 PARP1 2 PDCD1 2 PHF8 2 RAD50 2 RARA 2 RUNX1 2 RYR2 2 SAMD9L 2 SDHA 2 SENP5 2 SF3B1 2 SMARCB1 2 SMO 2 SPAG17 2 TBX3 2 TEX14 2 WT1 2 XPO1 2 ABCC2 1 ABCC3 1 ACE 1 AKT2 1 AKT3 1 ALDH2 1 ALOX12B 1 ARHGAP9 1 ASH1L 1 ATIC 1 B2M 1 BARD1 1 BCL2L2 1 BLM 1 BRD7 1 BRINP1 1 BTG1 1 BTK 1 BTN3A1 1 CASP8 1 CCDC178 1 CCND3 1 CD55 1 CD79A 1 CDC73 1 CDKN1A 1 CDKN1C 1 CDKN2C 1 CEBPA 1 CENPF 1 COL11A1 1 CRKL 1 CSF2RB 1 CTSS 1 CUL3 1 CYP2B6 1 CYP2C19 1 CYP2C8 1 CYP2C9 1 CYP2D6 1 CYP2E1 1 CYP2R1 1 D2HGDH 1 DDR2 1 DPYD 1 ECT2L 1 EGF 1 EIF4A1 1 EIF4G3 1 EPCAM 1 EPHA4 1 ERCC1 1 ERRFI1 1 ETV4 1 FAM135B 1 FANCE 1 FANCG 1 FAT2 1 FAT3 1 FLCN 1 GALNT12 1 GATA1 1 GLI3 1 GNA11 1 GNA13 1 GNAQ 1 GPC3 1 GSTP1 1 HK2 1 HOXA13 1 IDH2 1 IDH3A 1 IGF2 1 IKBKE 1 IQGAP1 1 IRF4 1 IRS1 1 JAG1 1 JUN 1 KCNB2 1 KLF6 1 KMT2B 1 LDHAL6A 1 LGALS3 1 LIFR 1 LIPF 1 LRP1B 1 LRRC4C 1 MAP2K2 1 MAP2K3 1 MEP1B 1 MET 1 MITF 1 MKI67 1 MLH3 1 MMP16 1 MPL 1 MSH2 1 MTR 1 MUTYH 1 NAT2 1 NCOR1 1 NFATC2 1 NLRP3 1 NUDT15 1 PAX5 1 PDCD1LG2 1 PDE4DIP 1 PDGFB 1 PDXK 1 PGK2 1 PIK3R2 1 PLAG1 1 PLAUR 1 PMS2 1 PPIP5K2 1 PPP2R1A 1 PRDM2 1 PRKCB 1 PRKCI 1 PTGES 1 PTGR1 1 PTPRB 1 PTPRG 1 RAD21 1 RAD52 1 RARB 1 RBM10 1 RNF43 1 RPS6KB1 1 RTEL1 1 RUNX1T1 1 SDHAF2 1 SDHB 1 SETD3 1 SLIT1 1 SLX4 1 SMAD3 1 SOX1 1 SOX17 1 SOX2 1 SRC 1 SRCAP 1 STAG2 1 STAT6 1 STS 1 SUFU 1 SYNPO2 1 TBX5 1 TCN1 1 TGFBR1 1 TGFBR3 1 THRB 1 TM6SF1 1 TMEM51 1 TMEM99 1 TMPRSS2 1 TP73 1 TRPV4 1 TSHR 1 TTLL2 1 UMPS 1 UPP1 1 USP25 1 VWF 1 WHSC1L1 1 WISP3 1 WNT11 1 ZADH2 1 ZBTB17 1 ZBTB2 1 ZNF331 1